| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_0676 |
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| Symbol | |
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| ID | 3905264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 771298 |
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| End bp | 772062 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637878009 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_479789 |
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| Protein GI | 86739389 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00917144 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0792915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAC GGCTGGACGG CACCGTTGCC CTGGTGACCG GTGCGAGCAG CGGCATCGGT
GAGGCGACCG CCCGCGAGCT GGCCCGGCAC GGCGCCGCGA TGGCGCTGGT CGCGCGGCGC
GGCGACCGGC TCGAGCGCCT CGCCGCCGAC ATCACCGGCG CCGGCGGCAC CGCCCTCCCC
CTCCCGCTGG ACATCACCGA CCAGGCCCAG GCCGCCGACG CGGTGAAGCG CACCGTGGCG
GAGCTCGGCC GGCTCGATAC CGTCGTCAAC AACGCCGGTA TCATGCTGCC CGGGCCGATC
CTCGACGCGC CGACCGAGGA GTGGGACCGG ATGGTGGCCC TGAACCTGCA GGGCCTGCTG
TACGTCACCC ATGCGGCGCT GCCGCATCTG CTCACTGCCG CGGACGGCGG CCCCCGCCAG
GTCGCGGACC TGGTGAACAT CAGCTCGGTG GCGGGACGGC ACGCCACCAT GGGCGCCGGC
ATCTACAACC TCACCAAGTT CGGGGTGAAC GCGTTCACCG AGTCGCTGCG CCAAGAGGTC
ACCGCCCGGC ACGTGCGCGT CTCGGTGGTC GAACCGGGCT CCGTCGAGAC CGAGCTGAGG
TCCCATATCC GCGAGGAGAT CCGGAATATC GTCATGCGCC GCATCGCCGA CATCGAGCCG
ATGCAGTCCG AGGACATCGC GGACGCCGTT GCCTACATCG TCACCCGGCC GCGGCGGGTC
GCGATCAACG AACTGCTCAT GCGGCCCACC GAGCAGGTCG GCTGA
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| Protein sequence | MSERLDGTVA LVTGASSGIG EATARELARH GAAMALVARR GDRLERLAAD ITGAGGTALP
LPLDITDQAQ AADAVKRTVA ELGRLDTVVN NAGIMLPGPI LDAPTEEWDR MVALNLQGLL
YVTHAALPHL LTAADGGPRQ VADLVNISSV AGRHATMGAG IYNLTKFGVN AFTESLRQEV
TARHVRVSVV EPGSVETELR SHIREEIRNI VMRRIADIEP MQSEDIADAV AYIVTRPRRV
AINELLMRPT EQVG
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