65 homologs were found in PanDaTox collection
for query gene Cpin_5295 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_5295  Hydroxymethylglutaryl-CoA synthase  100 
 
 		 417 aa  873    Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0778158  normal  0.248767 
 
 
-
 
NC_007650  BTH_II1670  polyketide biosynthesis protein  69.64 
 
 		 418 aa  624  1e-177  Burkholderia thailandensis E264  Bacteria  normal  0.130518  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1384  putative polyketide biosynthesis protein pksG  63.88 
 
 		 419 aa  585  1e-166  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A1470  putative polyketide biosynthesis protein pksG  63.88 
 
 		 419 aa  585  1e-166  Burkholderia pseudomallei 668  Bacteria  normal  0.0349844  n/a   
 
 
-
 
NC_011884  Cyan7425_2884  Hydroxymethylglutaryl-coenzyme A synthase domain protein  66.11 
 
 		 419 aa  584  1.0000000000000001e-165  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.614903 
 
 
-
 
NC_007435  BURPS1710b_A2613  putative hydroxymethylglutaryl-coenzyme A synthase  63.64 
 
 		 419 aa  583  1.0000000000000001e-165  Burkholderia pseudomallei 1710b  Bacteria  normal  0.457692  n/a   
 
 
-
 
NC_012880  Dd703_1418  Hydroxymethylglutaryl-CoA synthase  64.29 
 
 		 420 aa  565  1e-160  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA1212  polyketide biosynthesis protein, interruption-N  66.58 
 
 		 389 aa  544  1e-153  Burkholderia mallei ATCC 23344  Bacteria  normal  0.737994  n/a   
 
 
-
 
NC_009727  CBUD_1931  hydroxymethylglutaryl-CoA synthase family protein  50.71 
 
 		 412 aa  420  1e-116  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.808673  n/a   
 
 
-
 
NC_013131  Caci_2595  Hydroxymethylglutaryl-CoA synthase  47.26 
 
 		 413 aa  381  1e-104  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_2601  Hydroxymethylglutaryl-coenzyme A synthase domain protein  41.71 
 
 		 424 aa  338  9.999999999999999e-92  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0233973  normal  0.914531 
 
 
-
 
NC_009708  YpsIP31758_2518  putative hydroxymethylglutaryl-coenzyme A synthase  36.85 
 
 		 412 aa  237  2e-61  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010465  YPK_2608  hydroxymethylglutaryl-coenzyme A synthase  36.85 
 
 		 412 aa  237  2e-61  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_1179  Hydroxymethylglutaryl-coenzyme A synthase domain protein  32.3 
 
 		 407 aa  228  1e-58  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010159  YpAngola_A2969  putative hydroxymethylglutaryl-coenzyme A synthase  37.32 
 
 		 397 aa  228  2e-58  Yersinia pestis Angola  Bacteria  normal  0.763389  hitchhiker  0.0000211937 
 
 
-
 
NC_007520  Tcr_1719  hydroxymethylglutaryl-coenzyme A synthase  33.15 
 
 		 389 aa  189  8e-47  Thiomicrospira crunogena XCL-2  Bacteria  normal  0.396765  n/a   
 
 
-
 
NC_009513  Lreu_0676  hydroxymethylglutaryl-CoA synthase  33.08 
 
 		 385 aa  176  6e-43  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.000000283469  n/a   
 
 
-
 
NC_008527  LACR_1666  hydroxymethylglutaryl-CoA synthase  31.81 
 
 		 384 aa  175  9.999999999999999e-43  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  0.696762  n/a   
 
 
-
 
NC_002976  SERP2122  hydroxymethylglutaryl-CoA synthase  33.7 
 
 		 388 aa  174  2.9999999999999996e-42  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_011887  Mnod_8252  hydroxymethylglutaryl-CoA synthase  32.38 
 
 		 396 aa  167  2.9999999999999998e-40  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.112958  n/a   
 
 
-
 
NC_008531  LEUM_1184  hydroxymethylglutaryl-CoA synthase  30.54 
 
 		 385 aa  164  3e-39  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.298537  n/a   
 
 
-
 
NC_013515  Smon_1291  hydroxymethylglutaryl-CoA synthase  33.24 
 
 		 383 aa  164  4.0000000000000004e-39  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_009487  SaurJH9_2569  hydroxymethylglutaryl-CoA synthase  31.64 
 
 		 388 aa  162  7e-39  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  1  n/a   
 
 
-
 
NC_009632  SaurJH1_2622  hydroxymethylglutaryl-CoA synthase  31.64 
 
 		 388 aa  162  7e-39  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008530  LGAS_1372  3-hydroxy-3-methylglutaryl CoA synthase  30.51 
 
 		 387 aa  155  9e-37  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.998569  hitchhiker  0.00000000102593 
 
 
-
 
NC_008528  OEOE_0968  hydroxymethylglutaryl-CoA synthase  31.45 
 
 		 389 aa  155  2e-36  Oenococcus oeni PSU-1  Bacteria  normal  0.032504  n/a   
 
 
-
 
NC_013721  HMPREF0424_0359  putative hydroxymethylglutaryl-CoA synthase  29.31 
 
 		 437 aa  151  2e-35  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_004116  SAG1316  HMG-CoA synthase  28.1 
 
 		 390 aa  148  2.0000000000000003e-34  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.717019  n/a   
 
 
-
 
NC_008532  STER_0621  hydroxymethylglutaryl-CoA synthase (HMG-CoA synthase)  30.33 
 
 		 391 aa  147  3e-34  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.000102903  n/a   
 
 
-
 
NC_013743  Htur_2310  Hydroxymethylglutaryl-CoA synthase  27.58 
 
 		 445 aa  133  5e-30  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_012029  Hlac_2313  Hydroxymethylglutaryl-coenzyme A synthase domain protein  27.82 
 
 		 447 aa  122  9.999999999999999e-27  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.859835  normal  1 
 
 
-
 
NC_013922  Nmag_0401  Hydroxymethylglutaryl-CoA synthase  27.92 
 
 		 445 aa  121  3e-26  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_013440  Hoch_4396  Hydroxymethylglutaryl-CoA synthase  30 
 
 		 369 aa  117  3.9999999999999997e-25  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0133862  normal  1 
 
 
-
 
NC_013158  Huta_2766  Hydroxymethylglutaryl-CoA synthase  28.57 
 
 		 444 aa  114  3e-24  Halorhabdus utahensis DSM 12940  Archaea  normal  1  n/a   
 
 
-
 
BN001303  ANIA_04923  hydroxymethylglutaryl-CoA synthase, expressed (Eurofung)  25.32 
 
 		 459 aa  111  3e-23  Aspergillus nidulans FGSC A4  Eukaryota  decreased coverage  0.000140052  normal  0.183137 
 
 
-
 
NC_013202  Hmuk_1739  Hydroxymethylglutaryl-CoA synthase  26.73 
 
 		 447 aa  102  9e-21  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_009043  PICST_83020  predicted protein  23.31 
 
 		 447 aa  100  5e-20  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  1  normal  0.203181 
 
 
-
 
NC_011728  BbuZS7_0703  hydroxymethylglutaryl-CoA synthase  26.2 
 
 		 407 aa  97.8  3e-19  Borrelia burgdorferi ZS7  Bacteria  normal  1  n/a   
 
 
-
 
NC_010085  Nmar_0828  hydroxymethylglutaryl-CoA synthase  23.68 
 
 		 464 aa  87.4  5e-16  Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.0208074 
 
 
-
 
NC_009441  Fjoh_0678  hydroxymethylglutaryl-CoA synthase  22.3 
 
 		 453 aa  86.3  0.000000000000001  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0215835  n/a   
 
 
-
 
NC_006692  CNG02670  conserved hypothetical protein  23.64 
 
 		 492 aa  85.5  0.000000000000002  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.250048  n/a   
 
 
-
 
NC_006685  CNC05080  hydroxymethylglutaryl-CoA synthase, putative  22.7 
 
 		 498 aa  79.7  0.00000000000008  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.0146937  n/a   
 
 
-
 
NC_011695  PHATRDRAFT_16649  predicted protein  23.03 
 
 		 461 aa  60.8  0.00000005  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.24052  n/a   
 
 
-
 
CP001800  Ssol_1607  hydroxymethylglutaryl-CoA synthase  24.79 
 
 		 350 aa  57.8  0.0000004  Sulfolobus solfataricus 98/2  Archaea  normal  1  n/a   
 
 
-
 
NC_008701  Pisl_0811  hypothetical protein  24.21 
 
 		 350 aa  57.4  0.0000005  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.836821  hitchhiker  0.000111453 
 
 
-
 
NC_007355  Mbar_A0551  hypothetical protein  24.02 
 
 		 349 aa  55.5  0.000002  Methanosarcina barkeri str. Fusaro  Archaea  normal  1  normal  1 
 
 
-
 
NC_011831  Cagg_0548  3-oxoacyl-(acyl carrier protein) synthase III  24.15 
 
 		 339 aa  55.1  0.000002  Chloroflexus aggregans DSM 9485  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009440  Msed_1646  hypothetical protein  21.47 
 
 		 348 aa  53.9  0.000005  Metallosphaera sedula DSM 5348  Archaea  normal  1  normal  1 
 
 
-
 
NC_009954  Cmaq_1240  hypothetical protein  22.79 
 
 		 349 aa  53.5  0.000007  Caldivirga maquilingensis IC-167  Archaea  normal  0.0625222  hitchhiker  0.00968227 
 
 
-
 
NC_009073  Pcal_1082  hypothetical protein  23.14 
 
 		 350 aa  52.8  0.00001  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal  1 
 
 
-
 
NC_010525  Tneu_1356  hypothetical protein  23.58 
 
 		 351 aa  50.4  0.00006  Thermoproteus neutrophilus V24Sta  Archaea  normal  0.711945  normal  1 
 
 
-
 
NC_009376  Pars_0793  hypothetical protein  24.35 
 
 		 349 aa  50.4  0.00006  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  1  normal  1 
 
 
-
 
NC_003912  CJE1492  3-oxoacyl-(acyl carrier protein) synthase III  29.86 
 
 		 353 aa  44.3  0.004  Campylobacter jejuni RM1221  Bacteria  normal  1  n/a   
 
 
-
 
NC_008787  CJJ81176_1319  3-oxoacyl-(acyl carrier protein) synthase III  29.86 
 
 		 353 aa  43.9  0.005  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.813034  n/a   
 
 
-
 
NC_006349  BMAA1214  polyketide biosynthesis protein, interruption-C  45.24 
 
 		 43 aa  43.5  0.007  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0538803  n/a   
 
 
-
 
NC_011353  ECH74115_1470  3-oxoacyl-(acyl carrier protein) synthase III  28.57 
 
 		 317 aa  43.1  0.008  Escherichia coli O157:H7 str. EC4115  Bacteria  unclonable  0.00000000946289  hitchhiker  0.00000000000127697 
 
 
-
 
NC_011205  SeD_A2176  3-oxoacyl-(acyl carrier protein) synthase III  25.48 
 
 		 317 aa  43.1  0.008  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  hitchhiker  0.00253287  hitchhiker  0.000000000000149939 
 
 
-
 
NC_011149  SeAg_B1993  3-oxoacyl-(acyl carrier protein) synthase III  25.48 
 
 		 317 aa  43.1  0.008  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.00000000302649  n/a   
 
 
-
 
NC_011094  SeSA_A1263  3-oxoacyl-(acyl carrier protein) synthase III  25.48 
 
 		 317 aa  43.1  0.008  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  hitchhiker  0.00141014  normal  0.134616 
 
 
-
 
NC_011083  SeHA_C1307  3-oxoacyl-(acyl carrier protein) synthase III  25.48 
 
 		 317 aa  43.1  0.008  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.0184872  hitchhiker  0.000000000000113023 
 
 
-
 
NC_011080  SNSL254_A1292  3-oxoacyl-(acyl carrier protein) synthase III  25.48 
 
 		 317 aa  43.1  0.008  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  hitchhiker  0.000523087  hitchhiker  2.7964e-16 
 
 
-
 
NC_010658  SbBS512_E2233  3-oxoacyl-(acyl carrier protein) synthase III  28.57 
 
 		 317 aa  43.1  0.008  Shigella boydii CDC 3083-94  Bacteria  unclonable  0.00000000000000918964  n/a   
 
 
-
 
NC_010498  EcSMS35_2036  3-oxoacyl-(acyl carrier protein) synthase III  28.57 
 
 		 317 aa  43.1  0.008  Escherichia coli SMS-3-5  Bacteria  unclonable  0.000000000955089  decreased coverage  0.000000634537 
 
 
-
 
CP001637  EcDH1_2556  3-oxoacyl-(acyl-carrier-protein) synthase III  28.57 
 
 		 317 aa  43.1  0.008  Escherichia coli DH1  Bacteria  unclonable  0.00000000000000231699  n/a   
 
 
-
 
NC_009801  EcE24377A_1212  3-oxoacyl-(acyl carrier protein) synthase III  28.57 
 
 		 317 aa  43.1  0.008  Escherichia coli E24377A  Bacteria  hitchhiker  0.00000000000153107  n/a   
 
 
-
 
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