| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5295 |
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| Symbol | |
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| ID | 8361472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 6742731 |
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| End bp | 6743984 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644967443 |
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| Product | Hydroxymethylglutaryl-CoA synthase |
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| Protein accession | YP_003124927 |
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| Protein GI | 256424274 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0778158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.248767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAG TCGGAATTGA AGCAATGAAT GCTTTTGGTG GCACCTCATG CCTGGATATA
GCCCAGTTAT CAAATTACAG AGGACTTGAC AACAAGCGTT TTGAAAATCT GCTGATGAAA
GAAAAGGCAG TGGCGCTGCC TTATGAAGAT CCTGTCACTT TTGGGGTCAA CGCAGCGAAA
CCATTGGTGG ATAAACTTTC ACAGGCAGAG AAGGATCGTA TAGAACTGCT GATCACTTGT
ACCGAATCAG GTATTGATTT CGGGAAATCG ATCAGCACAT ACATCCACCA TTATCTCGGA
CTTAGCAGGA ATTGCCGTAT GCTGGAAATT AAGCAGGCTT GTTATGCCGG TACTTCCGGT
TTACAGATGG CGATCAATTT CATTCTCTCA CATACTTCAC CAGGTGCCAA AGCACTCGTG
ATTGCTACGG ATATATCCAG GTTTATCGTT ACGGATGGCG GCAACGCACA TGATCAGGAC
TGGTCTTTTG CAGAGCCGAG TGCGGGTGCA GGCGCTGTCG CGATGCTGAT CAGTGATACG
CCTTATACTT TCAGATTGGA TCAGGGCGCC AGTGGATACT ACGGCTATGA AGTAATGGAT
ACTTGTCGTC CGCTGCCGGA TAGTGAAGCC GGCGATGCGG ACCTGTCATT GATGTCTTAC
CTGGATTGCT GTGAGCAGTC ATTCAGAGAG TATACGAAGC GGGTGAAGAA TGTTTCTTAT
GATCACTCAT TTCAATACCT GGCTTTTCAT ACGCCTTTTG GTGGGATGGT GAAGGGCGCC
CATCGTACGA TGATGCGGAA GATGGTAAAG GCAAAACCAG ACGTGATTGA AAGTGATTTT
CAACAGCGGG TATCGCCCGG ATTACAGTAT TGTCAGCGCG TAGGGAATAT CATGGGCGCT
ACTGTATTCC TTTCACTGGC GGGTATTATT GATAGCGGGG ATTTTAAATC ACCCAGAAGA
ATCGGCTGTT TTTCCTATGG TTCCGGATGT TGCTCAGAGT TCTTTAGTGG TGTAGTGACA
GCAGAAGGAC AACAATACCT GCGGAATCAA CAGATAGGCA ATCAGCTGGA TAACAGGTAT
CGTTTGTCAA TGGAGGAATA TGAGATGCTT ATTGCCGGCG GACAGGCACT GAAGTTCGGT
ACGCGTAATG TAAAACCGGA CCGTTCGTTG CAACCACCCG TGCAGGAAGG ATTTGGAAGA
TTACAGTTAA ACGAGATAAA AGAGTTTCAC AGACGTTATG AATGGGTATC ATGA
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| Protein sequence | MKQVGIEAMN AFGGTSCLDI AQLSNYRGLD NKRFENLLMK EKAVALPYED PVTFGVNAAK
PLVDKLSQAE KDRIELLITC TESGIDFGKS ISTYIHHYLG LSRNCRMLEI KQACYAGTSG
LQMAINFILS HTSPGAKALV IATDISRFIV TDGGNAHDQD WSFAEPSAGA GAVAMLISDT
PYTFRLDQGA SGYYGYEVMD TCRPLPDSEA GDADLSLMSY LDCCEQSFRE YTKRVKNVSY
DHSFQYLAFH TPFGGMVKGA HRTMMRKMVK AKPDVIESDF QQRVSPGLQY CQRVGNIMGA
TVFLSLAGII DSGDFKSPRR IGCFSYGSGC CSEFFSGVVT AEGQQYLRNQ QIGNQLDNRY
RLSMEEYEML IAGGQALKFG TRNVKPDRSL QPPVQEGFGR LQLNEIKEFH RRYEWVS
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