| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nmar_0828 |
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| Symbol | |
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| ID | 5774020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosopumilus maritimus SCM1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_010085 |
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| Strand | - |
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| Start bp | 730969 |
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| End bp | 732363 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 641316466 |
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| Product | hydroxymethylglutaryl-CoA synthase |
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| Protein accession | YP_001582162 |
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| Protein GI | 161528336 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
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| TIGRFAM ID | [TIGR01835] 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0208074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCTG GAATTGATGA CATTTCCATA TACATCCCTA GATTATACAT TGATGCAGCA
GATTTTGCTG AAGCAAGAGG ATTAGACCCC GTAAAATTAC AAAAGGGCTT GGGAGTTTCT
CAAATGGCAA TAGTTGATGC CAATCAAGAC CCAGCAATAC TGGCTGCAAA CGCTTGTTTG
AAAATTATGC AAAAAAACAA GCTATCTCCA GAAGATATTG GTAGATTATA CGTTTCAACA
GAATCATCAT TTGATGAATC AAAGGCAATG AATTCTTTTG TGATTGGCAT GTTAGAGCAA
GTCTATGGTC AAGGTGCATT TGAGCACTGT GGTGGCGTTG AGACCAAATT TGCATGTGTT
AGTGGCTCTT ATGCTCTTTA TGACAATACA AATTGGATTA GAGCTGGAGA AGCAGAGGGA
AAACATGCCC TGGTAGTGGT ATCAGATATT GCAAAATATG ATATGGGTTC TAGTGGAGAA
ATGACACAGG GTGCAGGAGC TGTAGTGATG CTTCTCAATG ATAATCCAAG ATTATTAGCA
TTTGATCCTA AAGTAACATC AACATCAATT AAAGATGAAT ATGACTTTTA CAGACCATTT
GGAAAAGAGA CCCCAATCGT TCATGGTCAA TATTCCAACA TGTTATACAT GATTCAAGTA
AGAAAAGCAC TAGAAGCATA CAAGAAAAAA GTAATCTCAA CTAAATTAAT CAACATAGAG
CAAGGGGAAA CAATACTAGA CCACATGGAT TACATCAACA TGCACTTGCC ATACAGCAAC
ATGGGAAAGA AGGCATTAGC ATATTTGGTA AGACATGAAT GGCGTCAACT TCCAAGATGG
AAAAAAGTTC TACAAGAAAT TGGAATGGAT GAACCAATTC CAAAAGATCC TCGAGGAACT
ATAGAATCAG TATTGGGAGA TGAAGAGTTT ATGGCAAAAG ATCACGAGTT TACAAAATTA
TTTACAAAGA CTCCAGAATA TCAAGAAGTC TATGAATCAA AACTTGCAAG TTCACTTATT
GCATCTAGTA TGATTGGTAA CTTGTATACT GCATCACTTT ACTTGGGATT CAGAAGTAGT
TTAGAATTTG AATATCAAAA AGGAATTCAA TTAGAAGGTA AAAGAATTGG GTTTGGTTCC
TATGGAAGTG GCAGTAGTGC AATGGTGTTT AGTGGCGTTA TTCAACCAGA GTTTGAAGAG
ATTGTAAAGA ATATGAATTT GGAAGCTGAA ATTGGTGAAA GACGAAGACT AACTTGGGAA
GAATATGAAG AATTACATGA AAACAAGTTG TCTCCAGAAG AATCCATGCT CAAATCCAAA
AAAGAATTCA GTCTAGTGGA TGTAAAAACT GAAACTGAAT CTAGAGGCGA AAGACGTTAC
ATCTATAACG AATAA
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| Protein sequence | MAAGIDDISI YIPRLYIDAA DFAEARGLDP VKLQKGLGVS QMAIVDANQD PAILAANACL
KIMQKNKLSP EDIGRLYVST ESSFDESKAM NSFVIGMLEQ VYGQGAFEHC GGVETKFACV
SGSYALYDNT NWIRAGEAEG KHALVVVSDI AKYDMGSSGE MTQGAGAVVM LLNDNPRLLA
FDPKVTSTSI KDEYDFYRPF GKETPIVHGQ YSNMLYMIQV RKALEAYKKK VISTKLINIE
QGETILDHMD YINMHLPYSN MGKKALAYLV RHEWRQLPRW KKVLQEIGMD EPIPKDPRGT
IESVLGDEEF MAKDHEFTKL FTKTPEYQEV YESKLASSLI ASSMIGNLYT ASLYLGFRSS
LEFEYQKGIQ LEGKRIGFGS YGSGSSAMVF SGVIQPEFEE IVKNMNLEAE IGERRRLTWE
EYEELHENKL SPEESMLKSK KEFSLVDVKT ETESRGERRY IYNE
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