Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2608 |
Symbol | |
ID | 6088883 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2861462 |
End bp | 2862700 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641597676 |
Product | hydroxymethylglutaryl-coenzyme A synthase |
Protein accession | YP_001721338 |
Protein GI | 170024833 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
TIGRFAM ID | [TIGR01835] 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGTA TTGGTATTGA AAAAATCAGT ATCTACCCAA GTAGTTTGGC GCTGAAATTA TCTGAATTGG CACAAGCACG TGGTGGGGAC AATAAATACA TTCAAGAATC TTTAATGGTC ATAAAGCGCA GTTTGGTACC ACAGTGGGAA GATGCGGTCA CCCTTGCCGT CAATAGTGCC AAGGATATGC TTAACGATCA GGATCGTTCG GATATCGGTT TATTTATCAT TGCAACAGAA TCAGGTTTAG ACCAAGAAAA GGCCATCAGT ACTTGGGCGC ATCGTTATTT AGGATTACCT GCGACTTGCC GTGTTTTTGA ACTGAAATCT GCCTGCCATG CTGGTGCTGC GGCATTAAAG ATGGCTGAGT CATGGATATC GTCCGGCCTT AATCGAGGGA AAAAGGTATT ACTGATCAAC GTGGATATCA GTAATAATAT GATTTGCCAC GGGAAGATGG AATATAGCCT TGGTGCTGGG GCCATTGCTT TACTTATCTC AGATAATCCC GTTTTTGCCG TTATTGAAAC AGGGAAATCG GGTATTCATA CTCATGAAGT GACGGATGTT ATTCGCCCAC TTCCCTGGAA AGAGGTCGCT TTCGATGTAG AAGCCAGCCT TTTCTCTTAT ATGGATGGAC TCGAGAATGC TTTCGAGGAA TATTGTCATC AGACACCGGA GGCCAGAGAA AGTACCTATT TCAATTATAA CTTATACCAT GTCCCTTTCC CTGGCATTAG TAAAGAAGCA CATAAAGTAT TATTAGAACT ACAAGGACTC TTTGGAAAAG AGGCGCTAGC CACTTCATTT AAGCAAAAAG TCATGCCATC CCTGTATTAC GCGCAAAAAA TAGGCGCGAC CTATTGTGGC AGCATTTTCC TTTCCCTATT TTCACTTATG GTGAAAGCAC CAGAGATTAA ATCAGGGGAT CGAATAGGGG TCTACTCTTA TGGTTCAGGA TCCTGTGCCG AGTATTTCAG CATGCAGGTC GGGGACCAGG CAGTAGAGAT TGCACAACAG CAAGGTGCAG CGTTGGACAT ACTGCTTACC CAGCGGAAAA TACTGGATGT GGCGGCATAC GAGCAACTGG AAAATGCACG TAGCGCACAA ATGCAAGGTA AAGACTATCG TTTAGACGGG GACAACTTAC AGGACTGGTA TACACACCAT TACAGCGGGA GTGGGCTCCT TATTCTTGAG CGTATCGATA ACCACTTACG GCGTTATCGC TATGCATGA
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Protein sequence | MNSIGIEKIS IYPSSLALKL SELAQARGGD NKYIQESLMV IKRSLVPQWE DAVTLAVNSA KDMLNDQDRS DIGLFIIATE SGLDQEKAIS TWAHRYLGLP ATCRVFELKS ACHAGAAALK MAESWISSGL NRGKKVLLIN VDISNNMICH GKMEYSLGAG AIALLISDNP VFAVIETGKS GIHTHEVTDV IRPLPWKEVA FDVEASLFSY MDGLENAFEE YCHQTPEARE STYFNYNLYH VPFPGISKEA HKVLLELQGL FGKEALATSF KQKVMPSLYY AQKIGATYCG SIFLSLFSLM VKAPEIKSGD RIGVYSYGSG SCAEYFSMQV GDQAVEIAQQ QGAALDILLT QRKILDVAAY EQLENARSAQ MQGKDYRLDG DNLQDWYTHH YSGSGLLILE RIDNHLRRYR YA
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