Gene Huta_2766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_2766 
Symbol 
ID8385072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp2839272 
End bp2840606 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content64% 
IMG OID644973841 
ProductHydroxymethylglutaryl-CoA synthase 
Protein accessionYP_003131660 
Protein GI257053827 
COG category[I] Lipid transport and metabolism 
COG ID[COG3425] 3-hydroxy-3-methylglutaryl CoA synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACAG TGGGCATCGA CGCTGTCGAG ATCCGCACTG GGAATCTCAA ACTCGACCTG 
GCGGAGACGT TCGCCCCCGC CAAGGACGAA GACCCGGCGA AATATACCAA AGGCCTCGGC
TTGCATTCGA GTTCGTTCCC GGACGTCTAC GAGGACATCG TCACGATGGG CGCGAACGCG
GGCAAGCGTC TGATGGATCG AAAGGGGCTC GAACCTGACG ATATCGGCCG GATCGACGTG
GCGACCGAGA GCGCGTTCGA TCACTCCAAG CCGGCTTCGA CGTATATCGC CGGGTGTCTC
GAAGACGTCT ACGAGGGGGA CTTCCATCAC GCGAACAAGG GTGAACGGAA GTTCGCCTGC
GTCGCCGGCA CCCAGGCGAT CGACGACGCG GTCAACTGGA TCGGTTCCGG GAAGAACCGC
GGGCGAGCGG CACTCGTGAT CGCCACCGAC ACTGCGCTCT ATGCACGGGG AGATTCCGGC
GAGGCGACAC AGGGTGCTGG CGCGGTCGCC ATGCTGATCG ACGAGGATCC GAGTCTCGTC
TCGGTCGATC CCGTCCAGGG CTTTGGCAGC GCCGACGAGA CGGACTTCCT CAAACCCAAC
CAGCAGTTCC CGAGCGTCGA CGGCAAGCGC TCGATGCAGG TCTACCTCGC GCGGATGCGC
GAAGCACTGA CGGACGTCGA ACGCCAGCGT GATCTCCACC CGGATGACTT CGCCGTCGTG
CCGTTCCACA TCCCCTTCCC CGGGATGGTC CGGAAGGGTG CGGCACTCGG CTATCGCCAC
ATCTCTCGCG GGACGGACGT CGAGGAGGAG CTCGCCGAGG AGATCGGAAT GCAGCCACGG
CGGGAGGACT TCGAGGACGA CGAGGCCTTC CGTGACGCGC TGACGGAGTA CACGGATAGC
CTGACCGAGA CCGATCGCTA TCGCGAGTGG TACGACCGCA CGGTCGAGCC AACGCTTGGT
ATCTCCCGGC ACGTCGGCAA CTGGTACACC GGCTCGGTCC ACCTGGCGCG GGCATCGGCA
CTCAAAGAAG CCAGAGAGAG CGGCCGTGAT CTCGACGACG AAGAGATGCT GGTCTGTTCG
TACGGCAGCG GTGCGCAGGC CGAGATCCAC ATCGAGACCG TCCAGCCCGG CTGGGAGGAC
GAGATCGCCG CGCTCAACGT CGACGAACAG CTCCGGGATC GCTACGATAT CACTTTCGCC
GAATACGAGC AGATCCACGA GGTTCACAAC TACGACGAGA CCACCGACAT CGACGCGTTC
ACCACGCCCG AAGCGGAGTT CGTCTTCGAC GGCTGGGGGC GCATGGGCGA GCGCAAGTAC
ACCTACGTCG AATAG
 
Protein sequence
MTTVGIDAVE IRTGNLKLDL AETFAPAKDE DPAKYTKGLG LHSSSFPDVY EDIVTMGANA 
GKRLMDRKGL EPDDIGRIDV ATESAFDHSK PASTYIAGCL EDVYEGDFHH ANKGERKFAC
VAGTQAIDDA VNWIGSGKNR GRAALVIATD TALYARGDSG EATQGAGAVA MLIDEDPSLV
SVDPVQGFGS ADETDFLKPN QQFPSVDGKR SMQVYLARMR EALTDVERQR DLHPDDFAVV
PFHIPFPGMV RKGAALGYRH ISRGTDVEEE LAEEIGMQPR REDFEDDEAF RDALTEYTDS
LTETDRYREW YDRTVEPTLG ISRHVGNWYT GSVHLARASA LKEARESGRD LDDEEMLVCS
YGSGAQAEIH IETVQPGWED EIAALNVDEQ LRDRYDITFA EYEQIHEVHN YDETTDIDAF
TTPEAEFVFD GWGRMGERKY TYVE