| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcal_1082 |
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| Symbol | |
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| ID | 4909657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum calidifontis JCM 11548 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009073 |
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| Strand | - |
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| Start bp | 1016272 |
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| End bp | 1017324 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640124834 |
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| Product | hypothetical protein |
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| Protein accession | YP_001055973 |
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| Protein GI | 126459695 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
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| TIGRFAM ID | [TIGR00748] hydroxymethylglutaryl-CoA synthase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGC TCGGAGTAGT AAGCTGGGGC GCATATATAC CGAGATACAG GGTGAGGACC
GAGGAAGTGT CGAGGATCTG GGGCGACGAC CCGTTGCGAA TTGTAGACAT GTATCTCGTC
GATGAGAAAA GCGTGGAAGG AATAGACGAA GACGCCGTGA CCATAGCCGT GGAGGCGGCC
AGGAGGGCCA TAAGGAGGGG CGGCATCGAC CCCCGGAAGA TTGGGGCAGT CTACGTGGGC
ACAGAGTCTA AGCCCTACGC AGTCAAGCCC ATCTCCTCCA TCCTCATAGA CGCGCTCGGG
CTGACCAACA ACGTCTTCGC CGTCGACATG GAGTTCGCCT GTAAGGCGGG AAGCGACGGA
TTGGTGGCCG CCATAGGCCT AGTGGAGGCC GGGCGCGTGG AGTACGGCAT GACCGTGGGC
ACAGACACGT CGCAAGGAGA GCCAGGCGAG CATTTGGAGT ACTCCGCCAG CAGCGGCGGC
GTGGCGCTTA TAGTGGGCAA AGACGGCGTG GCGGCCGAGC TCGAGGCCAT GTACGCGTTT
GTATCCGACA CGCCGGACTT CTGGAGGAGG GAGGGGTCGC CGTATCCCAT GCACGGCGAG
GGCTTCACAG GCGAGCCCGC CTACTTTAGA CACGTGATCG GGGCGGCGAA AGGCTTGATG
GAGAAATATG GCTACAAGCC GTCGGATTTC ACATACGTCG TATTCCACCA GCCCAACGGC
AGATTCCCCG TCCGCGCGGC GTCTATGCTC AACATCCCCC TAGACAAGGT CAAACCCGGC
ATTGTGGTGA CGCACATTGG CAACACCTAC AACGCCTCGG CGTTGATGGG ATTTGCAAAA
GTCCTCGACA TAGCCAAGCC CGGCGACAAG ATCTTGCTCG TGCCATTCGG CAGCGGCGCG
GGGTCCAACG CCTTCGTCTT CACAGTAACC GACGTGGTCA AGGACAGGCA GAAGATGGGC
GTGCCAACGG TCGAGGAAAT GCTCCAAGAC AAAATACTCG TTGACTACGC CCAGTATCTA
AAGATGCGTA AAATGATTAA ACTATTCGAG TAA
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| Protein sequence | MSKLGVVSWG AYIPRYRVRT EEVSRIWGDD PLRIVDMYLV DEKSVEGIDE DAVTIAVEAA
RRAIRRGGID PRKIGAVYVG TESKPYAVKP ISSILIDALG LTNNVFAVDM EFACKAGSDG
LVAAIGLVEA GRVEYGMTVG TDTSQGEPGE HLEYSASSGG VALIVGKDGV AAELEAMYAF
VSDTPDFWRR EGSPYPMHGE GFTGEPAYFR HVIGAAKGLM EKYGYKPSDF TYVVFHQPNG
RFPVRAASML NIPLDKVKPG IVVTHIGNTY NASALMGFAK VLDIAKPGDK ILLVPFGSGA
GSNAFVFTVT DVVKDRQKMG VPTVEEMLQD KILVDYAQYL KMRKMIKLFE
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