| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pisl_0811 |
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| Symbol | |
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| ID | 4617688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum islandicum DSM 4184 |
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| Kingdom | Archaea |
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| Replicon accession | NC_008701 |
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| Strand | - |
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| Start bp | 728413 |
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| End bp | 729465 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639783906 |
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| Product | hypothetical protein |
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| Protein accession | YP_930330 |
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| Protein GI | 119872323 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
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| TIGRFAM ID | [TIGR00748] hydroxymethylglutaryl-CoA synthase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.836821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.000111453 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCCGCG TTGGTATAGT AAGTTGGGGC GCGTATATAC CAAAATACCG GATTAGGACA
GAGGAGGTGG CTAAAATCTG GGGTGATGAC CCTCTACGAA TTGTAGATCT GTATCTTGTT
GATGAAAAGA GTGTAGAGGG AATAGACGAA GATGCTGTAA CCATAGCGGT TGAGGCTGCT
AAGAGAGCTT TGAAGAGGGC GAGGATAGAC CCAAAGCGTA TAGGGGCGAT TTATGTCGGT
ACGGAATCTA AGCCATATGC CGTAAAGCCA ATATCTTCTA TACTAGTAGA CGCGTTGGGG
CTTAGCAATA ACGTGTTTGC TGTCGATATG GAATTTGCAT GTAAGGCAGG TAGCGAGGGC
CTAATGGCAG CTGTGGGGCT TGTAGAATCT GGTAGAATTG AATATGGTAT GACGGTAGGT
GCGGATACGT CGCAAGGAGA GCCCGGCGAG CATTTAGAAT ACTCTGCCAG CAGTGGAGGG
GTTGCATTAA TTGTGGGGAG AGATGGTATA GTCGCAGAGC TGGAGGCTGT GTATTCGTTT
GTATCGGATA CGCCCGACTT TTGGAGAAGA GAGGGATCAC CATATCCTAT GCACGGAGAG
GGTTTTACAG GGGAGCCTGC ATATTTTCGT CACATTATAG GAGCTACTAG AGGTCTCATG
GAAAAATATG GGTATAAGCC CTCTGACTTT ACATATGCGG TATTTCATCA ACCAAATGGC
AGATTTCCAG TTCGTGTAGC ATCGATGTTA AACATTCCTA TAGAGAAGGT AAAGCCAGGA
ATTGTAGTTA CACACATAGG CAATACGTAT AACGCCTCGG CATTAATGGG GTTCGCCAAG
ATCCTTGACA TGGCCAAACC CGGAGACAAA ATATTACTTG TGCCGTTTGG AAGCGGTGCT
GGGTCTAATG CATATGTATT TACTGTCACA GATACAATTC TAGAAAGACA AAAAACGGAC
GTGCCTACTG TGGAGCAGAT GTTGCGTGAC AAGATATACA TAGACTATGC GCAGTATCTA
AAAATGCGTA AAATGATAAA ATTATTTGAG TAA
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| Protein sequence | MSRVGIVSWG AYIPKYRIRT EEVAKIWGDD PLRIVDLYLV DEKSVEGIDE DAVTIAVEAA
KRALKRARID PKRIGAIYVG TESKPYAVKP ISSILVDALG LSNNVFAVDM EFACKAGSEG
LMAAVGLVES GRIEYGMTVG ADTSQGEPGE HLEYSASSGG VALIVGRDGI VAELEAVYSF
VSDTPDFWRR EGSPYPMHGE GFTGEPAYFR HIIGATRGLM EKYGYKPSDF TYAVFHQPNG
RFPVRVASML NIPIEKVKPG IVVTHIGNTY NASALMGFAK ILDMAKPGDK ILLVPFGSGA
GSNAYVFTVT DTILERQKTD VPTVEQMLRD KIYIDYAQYL KMRKMIKLFE
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