Gene Cagg_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0548 
Symbol 
ID7267045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp666456 
End bp667475 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content57% 
IMG OID643565411 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_002461923 
Protein GI219847490 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCTTCA AGCATGTCAT GATCGAAGCA GTTAGTTATG TATTAGCTCC CCATCGTATT 
ACATCGGCTT GGATCGAGGA TCAGATCGCC GAAACAATGG AGCGTTTGCG TTTTCCGCGC
GGTAAGCTAG AAGCTCTTTC AGGTATCCGC GAGCGCCGGT TCTGGGATGA AGGAACGCTG
CCCAGCACGG TGGCAACGAT GGCGGCTGAA CAACTGCTCC AGCAGGTATC CGTTGATCGT
GACCGGATCG GGCTACTTAT TAATACTTCG GTGTGTCAAG ACTATCTCGA ACCCTCAACG
GCTTGCTTTG TTCACCGTAA CCTCGGCCTG TCACCGCGCG CAATCAATTT CGATGTGCGT
AATGCATGCC TTGGTTTCTT GAATGGAATG GCAATTGCCG GGATGATGAT CGAAGCCGGC
ACGATCGAGT ATGCGCTGAT TGTGGATGGC GAAGGGTCGC AAGATGCGGT GATGGCGACG
ATCCGCCGCT TGCGCCGGCC CGAAACCACC AAGCAAGATT TGCGCGACAA TTTCGCGACC
CTCACCTTGG GGTCGGGCGG TGCCGCGATG TTGCTCACCC ATGAGTGCCT CTCACGCAGC
GGCCATCGCT TAAACGGTGT GGTCACACTG GCGGCGACCC AATACAATCA CCTTTGCCTC
GGTCAGCCCG ATTATATGAA GACCGATGCC GGCGCGCTGA TGCATGCCGG GGTTGAGTTG
GCGACAGCGA CGTGGCGGTT GGCCCAAGAG ACACTGCCAA ACTGGAGCGA TCGCCAGATC
GCGCTCTATG CGCCGCATCA GGTTGGTGCG CGCCACATGG CGGCGGTCAC CAAAGCGCTG
GGAATTACGC CGTCTAAGCT CTTTCTCAAC TTTCCAACCC TTGGCAACAT TGGGCCGGCT
GCCTTGCCGA TCTCGCTGGC CCAAGCCGTG GAAGCGGGCC GGTTGCGGCC CGGCGATCAC
GTTGGCTTAT TGGGGATTGG TTCGGGCCTA AATTGTTCGA TGATGAGCGT GACGTGGTGA
 
Protein sequence
MLFKHVMIEA VSYVLAPHRI TSAWIEDQIA ETMERLRFPR GKLEALSGIR ERRFWDEGTL 
PSTVATMAAE QLLQQVSVDR DRIGLLINTS VCQDYLEPST ACFVHRNLGL SPRAINFDVR
NACLGFLNGM AIAGMMIEAG TIEYALIVDG EGSQDAVMAT IRRLRRPETT KQDLRDNFAT
LTLGSGGAAM LLTHECLSRS GHRLNGVVTL AATQYNHLCL GQPDYMKTDA GALMHAGVEL
ATATWRLAQE TLPNWSDRQI ALYAPHQVGA RHMAAVTKAL GITPSKLFLN FPTLGNIGPA
ALPISLAQAV EAGRLRPGDH VGLLGIGSGL NCSMMSVTW