Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0678 |
Symbol | |
ID | 5091423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 743902 |
End bp | 745263 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644740079 |
Product | hydroxymethylglutaryl-CoA synthase |
Protein accession | YP_001193032 |
Protein GI | 146298441 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
TIGRFAM ID | [TIGR01835] 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0215835 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAG GAATTGATGC TATATCTTTT GACGTAGCAA ACATACATTT ACCCATAAAA ACTTTGGCCA TTGCCAGAAA TATTGAACCA GAAAAATTAG AAAAAGGTCT TGGATTACTA AAAATGACTT TCCCGGACGT TCATCAGGAC GCTGTTGTTT TTGGAGCAAA TGCTTTAACC AAGCTTATCA TTGATAATAA AATTGACTTA AAAGAAATAA GCCGAATTTA TGTTGGTACC GAAAGCAGCA TTGACAGCTC TAAACCAATT GCTTCTTATT TAATTAGTTT AATGGAGCAA AAATTTGGCG AAGATTCACT AGCAGAATGT GATGTTGTAG ATTTTACTTT TGCCTGCATT GGCGGAGTTG ACGCGATGCA AAACTGTCTT GATTTCGTAA AATTAAATCC AGCAAAAAAA GCAATTGTAG TTACTTCTGA TTTTGCAAAA TACGACTTAA ACTCTGGCGG AGAATATACG CAAGGTGCCG GAGCAGTTGC AATGCTGATT ACCGCAGACC CAAAAATTAT TGCTTTTGAT GACAATTGGG CAACAAGCAC AAAAGGCGTT TTCGATTTCT TTAAACCATA CAGAACTATC TCTAAAGAAG AAATTACAAA AAATACCAGC AACGACCCTT GGTTTGACAA TTTAGAAGCC GAAATTGAAA TCCATAAAGA CCAGCCGGTT TTTGACGGAC AATATTCTAA CCAATGTTAT ATGGATCGTA CGCGCAATGC CTACTTTTCA TTCAAAAAAT TAAAAAACAC TACCGAAACT CTTTATAACA CTTGGCACAG TATCGTAATG CACCTGCCAT ATTCTTTCCA GGGAAGAAGA ATGTTATCTG AAATCTACGC TTTAGACAGT GCCGAAAAAA TTATCGCTGA TGATATTGCA CCAGCCGATT ATCAGACAAA AATTAAAGAA GTGGCAAAAT CTGATGATTA CAGAAGTTTT GTAACCGAGA AATTACAACC TGCAGAATTG GCTTCTTCTT TAATAGGAAA CCTTTACACT GGTTCTATTT TCATGGGATT GTTATCGACT TTGGCTCATT TTTATGATAC AAAAAAAGAA GTTGCAGGAA CTAAATTTGG TTTCCTTGCT TATGGAAGCG GATCAAAATC GAAAGTTTTT GAAGGAACGA TTCAGCCAGA ATGGAAATCA GCTTTAGAAA ACGTAAAGCT TTTTGAAAAT TTAACCGAAA GCACAGAAAT TGATTTCAAC ACTTACGAAA GCCTTCATAA AAAAGAACAA AAACAAAGTA TAAGAACTCC AAAAAACGAA TGGATTTTAG ACAGAATCGA AAAAGAGATT CCTGTTTTAA TTGGAGCTCG TTATTATAAA TGGATTGATT AA
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Protein sequence | MKTGIDAISF DVANIHLPIK TLAIARNIEP EKLEKGLGLL KMTFPDVHQD AVVFGANALT KLIIDNKIDL KEISRIYVGT ESSIDSSKPI ASYLISLMEQ KFGEDSLAEC DVVDFTFACI GGVDAMQNCL DFVKLNPAKK AIVVTSDFAK YDLNSGGEYT QGAGAVAMLI TADPKIIAFD DNWATSTKGV FDFFKPYRTI SKEEITKNTS NDPWFDNLEA EIEIHKDQPV FDGQYSNQCY MDRTRNAYFS FKKLKNTTET LYNTWHSIVM HLPYSFQGRR MLSEIYALDS AEKIIADDIA PADYQTKIKE VAKSDDYRSF VTEKLQPAEL ASSLIGNLYT GSIFMGLLST LAHFYDTKKE VAGTKFGFLA YGSGSKSKVF EGTIQPEWKS ALENVKLFEN LTESTEIDFN TYESLHKKEQ KQSIRTPKNE WILDRIEKEI PVLIGARYYK WID
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