Gene Fjoh_0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0678 
Symbol 
ID5091423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp743902 
End bp745263 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content35% 
IMG OID644740079 
Producthydroxymethylglutaryl-CoA synthase 
Protein accessionYP_001193032 
Protein GI146298441 
COG category[I] Lipid transport and metabolism 
COG ID[COG3425] 3-hydroxy-3-methylglutaryl CoA synthase 
TIGRFAM ID[TIGR01835] 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0215835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAG GAATTGATGC TATATCTTTT GACGTAGCAA ACATACATTT ACCCATAAAA 
ACTTTGGCCA TTGCCAGAAA TATTGAACCA GAAAAATTAG AAAAAGGTCT TGGATTACTA
AAAATGACTT TCCCGGACGT TCATCAGGAC GCTGTTGTTT TTGGAGCAAA TGCTTTAACC
AAGCTTATCA TTGATAATAA AATTGACTTA AAAGAAATAA GCCGAATTTA TGTTGGTACC
GAAAGCAGCA TTGACAGCTC TAAACCAATT GCTTCTTATT TAATTAGTTT AATGGAGCAA
AAATTTGGCG AAGATTCACT AGCAGAATGT GATGTTGTAG ATTTTACTTT TGCCTGCATT
GGCGGAGTTG ACGCGATGCA AAACTGTCTT GATTTCGTAA AATTAAATCC AGCAAAAAAA
GCAATTGTAG TTACTTCTGA TTTTGCAAAA TACGACTTAA ACTCTGGCGG AGAATATACG
CAAGGTGCCG GAGCAGTTGC AATGCTGATT ACCGCAGACC CAAAAATTAT TGCTTTTGAT
GACAATTGGG CAACAAGCAC AAAAGGCGTT TTCGATTTCT TTAAACCATA CAGAACTATC
TCTAAAGAAG AAATTACAAA AAATACCAGC AACGACCCTT GGTTTGACAA TTTAGAAGCC
GAAATTGAAA TCCATAAAGA CCAGCCGGTT TTTGACGGAC AATATTCTAA CCAATGTTAT
ATGGATCGTA CGCGCAATGC CTACTTTTCA TTCAAAAAAT TAAAAAACAC TACCGAAACT
CTTTATAACA CTTGGCACAG TATCGTAATG CACCTGCCAT ATTCTTTCCA GGGAAGAAGA
ATGTTATCTG AAATCTACGC TTTAGACAGT GCCGAAAAAA TTATCGCTGA TGATATTGCA
CCAGCCGATT ATCAGACAAA AATTAAAGAA GTGGCAAAAT CTGATGATTA CAGAAGTTTT
GTAACCGAGA AATTACAACC TGCAGAATTG GCTTCTTCTT TAATAGGAAA CCTTTACACT
GGTTCTATTT TCATGGGATT GTTATCGACT TTGGCTCATT TTTATGATAC AAAAAAAGAA
GTTGCAGGAA CTAAATTTGG TTTCCTTGCT TATGGAAGCG GATCAAAATC GAAAGTTTTT
GAAGGAACGA TTCAGCCAGA ATGGAAATCA GCTTTAGAAA ACGTAAAGCT TTTTGAAAAT
TTAACCGAAA GCACAGAAAT TGATTTCAAC ACTTACGAAA GCCTTCATAA AAAAGAACAA
AAACAAAGTA TAAGAACTCC AAAAAACGAA TGGATTTTAG ACAGAATCGA AAAAGAGATT
CCTGTTTTAA TTGGAGCTCG TTATTATAAA TGGATTGATT AA
 
Protein sequence
MKTGIDAISF DVANIHLPIK TLAIARNIEP EKLEKGLGLL KMTFPDVHQD AVVFGANALT 
KLIIDNKIDL KEISRIYVGT ESSIDSSKPI ASYLISLMEQ KFGEDSLAEC DVVDFTFACI
GGVDAMQNCL DFVKLNPAKK AIVVTSDFAK YDLNSGGEYT QGAGAVAMLI TADPKIIAFD
DNWATSTKGV FDFFKPYRTI SKEEITKNTS NDPWFDNLEA EIEIHKDQPV FDGQYSNQCY
MDRTRNAYFS FKKLKNTTET LYNTWHSIVM HLPYSFQGRR MLSEIYALDS AEKIIADDIA
PADYQTKIKE VAKSDDYRSF VTEKLQPAEL ASSLIGNLYT GSIFMGLLST LAHFYDTKKE
VAGTKFGFLA YGSGSKSKVF EGTIQPEWKS ALENVKLFEN LTESTEIDFN TYESLHKKEQ
KQSIRTPKNE WILDRIEKEI PVLIGARYYK WID