| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tcr_1719 |
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| Symbol | |
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| ID | 3761017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiomicrospira crunogena XCL-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007520 |
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| Strand | + |
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| Start bp | 1879540 |
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| End bp | 1880709 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637786456 |
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| Product | hydroxymethylglutaryl-coenzyme A synthase |
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| Protein accession | YP_391985 |
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| Protein GI | 78486060 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
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| TIGRFAM ID | [TIGR01835] 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.396765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTTG GTATTGACTT AATTCACTTT GCAACCTCAG ATTATTTTTT GGGGTTGAAT
ACCTTTGCCA AGGAAAAAGG AACTGATGTA AATAAATATC TCATCGGTAT CGGGCAGGAA
CAAATGTCAA TCGCACCACC TGATGAAGAT ATCGTGACCC TTTCAGCAAA AGCCGCGGCA
CCGATTTTAG AACAAATTGA TAAGCAAAAA ATTACAGCGG TTTTATTCGC CACCGAATCG
GGCGTGGACC AATCAAAATC AGCTGGTGCT TTTTTACATG GGTTGCTCGA CCTACCAAAA
CGCTGTCGTG TCGTTGAATT CAAACATGCC TGTTATGCAG GAACAGCGGC ACTACAAATG
GCCAACACCA TGGTGAAAGC CAACCCTAAA GAAAACATTC TGGTGATAGC GGCCGATATT
GCTAAATACG ATGTGGATTC GTCAGGCGAA GCCACGCAAG GATGCGGCGC CGTCGCGATG
TTGGTGAAAG AAAACCCTCG TATCCTAAAC ATTGAACCCG GCTCGGGTTA TTACACAGAT
GATGTAATGG ACTTTTGGCG TCCTAATTAC CGCACCACAG CTTTAGTCGA CGGTAAATAT
TCAACCAAAG TGTATTTAAA CAGTCTTAAA CAAGCCTGGG AGCATTTTGT TGAAGAAACA
GGTCGTCATT TCGACAATAT CGACGCTTTC TGTTATCACA TTCCTTTTTC TCGGATGACC
GAAAAAGCGC ATAAGACCTT AATTAAAAAG GTAAAAGCCA ATGTTTCAGA TCAAACTTTT
AAGGAACAGA CTTTAGCGGG ACAGACATAC AACAGAGTCG TTGGCAACAG CTACAGTGCG
TCATTATTCA TTGGGTTCTG CTCATTCTTG GATAACGCCA CACAAGACTT AAGCAACAAA
CGATTTGGTT TCTTCAGTTA TGGTTCAGGA TGTGTCGCAG AATTTTTCAG TGGCGTCATT
CAACCCGGTT ATAAAGATCA CCTGATGACG GCTAGCCACC AAAAACAAAT TCAAAGTCGC
CAGGAGCTCA GTTATAAAGA GTATCTGACC TTTTATCATC AAACGGATGT TGATGCAGAG
AACATTAGTT TTTCTTCTTA TAACAAAGGG CTTTTCCGAT TAAAAGCCAT TCGTGATCAC
ATTCGAATTT ACGAAAAACA GGCTGTCTAG
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| Protein sequence | MKVGIDLIHF ATSDYFLGLN TFAKEKGTDV NKYLIGIGQE QMSIAPPDED IVTLSAKAAA
PILEQIDKQK ITAVLFATES GVDQSKSAGA FLHGLLDLPK RCRVVEFKHA CYAGTAALQM
ANTMVKANPK ENILVIAADI AKYDVDSSGE ATQGCGAVAM LVKENPRILN IEPGSGYYTD
DVMDFWRPNY RTTALVDGKY STKVYLNSLK QAWEHFVEET GRHFDNIDAF CYHIPFSRMT
EKAHKTLIKK VKANVSDQTF KEQTLAGQTY NRVVGNSYSA SLFIGFCSFL DNATQDLSNK
RFGFFSYGSG CVAEFFSGVI QPGYKDHLMT ASHQKQIQSR QELSYKEYLT FYHQTDVDAE
NISFSSYNKG LFRLKAIRDH IRIYEKQAV
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