| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_1739 |
|---|
| Symbol | |
|---|
| ID | 8411263 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013202 |
|---|
| Strand | + |
|---|
| Start bp | 1654293 |
|---|
| End bp | 1655636 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645020067 |
|---|
| Product | Hydroxymethylglutaryl-CoA synthase |
|---|
| Protein accession | YP_003177560 |
|---|
| Protein GI | 257387787 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACGG TCGGTATCGA CGCGATCGAG ATTCGGACGG GCAAGCTGCA ACTGGACCTC
GCAGAGACGT TTGCGCCGGC CCAGGACGAG GATCCCGGCA AGTACACGAA AGGGCTCGGT
CTCCACGTCT CTTCGTTCCC CGACGTGTAC GAGGACATCG TGACGATGGC GGCCAACGCG
GCACACCGGC TCATGGAGCG CAAGGGTCTG ACGCCCGACG ACATCGGCCG GATCGACGTG
GCGACGGAGT CGGCTTTCGA CAACTCCAAG CCCGTCTCGA CGTACGTCGC CGGCTGTCTC
GAACAGGTGT ACGACGACGA CTTCCACCAC GCTAACAAGG GCGAGCGGAA GTTCGCCTGC
ATCGCCGGGA CCCAGAGCCT CGACGACGCG TACAACTGGA TCCGCGCGGG CCGCAATCGC
GGCCGCAAGG CGCTCGTGAT CGCGACCGAC ACCGCGCTGT ACGCCCGCGA CGACCCCGGC
GAGGCCACAC AGGGTGCCGG CGCGGTCGCG ATGATCGTCG ACGAGAATCC CGACTTCGTC
GAGCTGTCGA CCGACCAGGG ATTCGGGAGC GCCGACGAGA CGGACTTCCT GAAGCCAAAC
CAGCAGTTCC CCTCCGTCGA CGGCAAGCGA TCGATGAAGG TGTATCTCGC ACGCATGCGC
GAGGCGATGG AGGACCTCGA ACGAGCCGGC GTCGACCTCC ACCCCGACGA CTTCGCGCTG
ATCCCGTTTC ACACGCCGTT CCCGGGCATG GTCCGCAAGG CCGCTGCTCT GGGCTATCGC
CACGTCTGCC GTGACACCGA CGTGGAACTG ACGCTGGCCG AGGAGATCGG CCGTCAACCC
CGCCGCGAGG AGTTCAAGAC ACAGGAGCAG TTCTTCGACG CCATCGAGGA GTACACGGAC
GCACTCACCG AGACGGAGCG CTACGAGGAC TGGTACGCCG ACACGATCGA ACCGACCCTC
GAAATCGCCC GCGAGGTGGG CAACTGGTAC ACCGGCTCCG TCCACGTCGC CCGCGTCGCC
GGCCTCAAGC ACGCACTGGA ACACGACCGA GACCTGACCG GGGCCCAGCT CCTCGTGGCC
TCCTACGGCT CGGGCGCACA GGCCGAGATC CACGCTGAGA CGGTCGCCGA CGGCTGGAAA
GCGGAAATCG AGGCGCTCAA CGTCGACGAC CAGCTCGACC GCCGCTACGA CATCTCCTTT
GCGGAGTACG AGCGCATCCA CGACGTACAC AACCACGACA CCGACGACTA CGCCGACGTG
GAGGAACTCA CCACGCCAAG CGAGGAGTTC GTCTTCGACG GCTGGGGTCG GATGGGCGAA
CGGAAGTATC GCTACGTGCG ATAG
|
|---|
| Protein sequence | MTTVGIDAIE IRTGKLQLDL AETFAPAQDE DPGKYTKGLG LHVSSFPDVY EDIVTMAANA
AHRLMERKGL TPDDIGRIDV ATESAFDNSK PVSTYVAGCL EQVYDDDFHH ANKGERKFAC
IAGTQSLDDA YNWIRAGRNR GRKALVIATD TALYARDDPG EATQGAGAVA MIVDENPDFV
ELSTDQGFGS ADETDFLKPN QQFPSVDGKR SMKVYLARMR EAMEDLERAG VDLHPDDFAL
IPFHTPFPGM VRKAAALGYR HVCRDTDVEL TLAEEIGRQP RREEFKTQEQ FFDAIEEYTD
ALTETERYED WYADTIEPTL EIAREVGNWY TGSVHVARVA GLKHALEHDR DLTGAQLLVA
SYGSGAQAEI HAETVADGWK AEIEALNVDD QLDRRYDISF AEYERIHDVH NHDTDDYADV
EELTTPSEEF VFDGWGRMGE RKYRYVR
|
|---|
| |