| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1646 |
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| Symbol | |
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| ID | 5104851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1587658 |
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| End bp | 1588704 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640507537 |
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| Product | hypothetical protein |
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| Protein accession | YP_001191725 |
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| Protein GI | 146304409 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
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| TIGRFAM ID | [TIGR00748] hydroxymethylglutaryl-CoA synthase, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACAG GTATCATTGG ATGGGGCTCT TACGTTCCGA AGTATAGAAT TAAGGTAAGC
GATATTGCCT CTGTTTGGGG CAAGGAGGAG GGAGTTGTTA AGGCACTAGG TCTCACGGAG
AAGTCAGTTC CAGCAGCTGA TGAGGACTCA ACGACGATGG CAATTGAGGC CTCTAGGGAT
GCCCTAACGA GGGCAATGAT TGACCCTAGG GAAGTTGAGA TGGCACTCTT TGGTTCTGAG
TCAAAGGTTT ACGCAGTGAA GTCAACCTCA GCGATCCTGA TAGACGCGCT TGGTCTGTCC
AAGTTCTCCT TAACGGCAGA CCTAGAGTTC GCCTGCAGGG CTGCTTCGGC AGGACTCAGG
ATGGCTTTCT CCATGGTCGA GAGCGGTCAG GTTTCCTACT CCCTAGTGGT TGGATCTGAT
ACGGCCCAAT CCAACCCAGG TGACGTCCTC GAGTTAAGCT CTGCCGCAGC TGCAGTTGCC
TTCGTTGTCG GAAGAGCGGA GGAGGCCTCA GCTGTGGTCG AGGCGAGTAC ATCCTACGTT
ACCGATACCC CGGATTTCTG GAGGAGGGAT GGAATGCCTT ACCCGCTTCA CGGGGAGGCC
TTCACAGGAG AACCAGCTTA CTTTGCCCAC ATTTATGAGG CCGTGAATAG GTTGCTTCAG
GACACCGGGC TCAAGGTTTC TGACTTTGAC TACTTTGTGT TTCACCAACC CAACGGAAAG
TTCCCGTTCC AGATGGCCAA GAAACTTGGG GTACCACTTG AAAAGGTGAA ACAGGGGATG
GTCTCAACCC TGATTGGGAA TCCCTACAAT GCCTCGGCTC TCCTCGGGTT CGCGAGGGTA
CTAGATGTGG CCAAGCCTGG CCAGAGGGTT CTCGTTGCTC CCTTCGGGAG CGGTGCTGGA
AGTGACGCAT ACAGCTTCGT GATAACTGAT AAGATCCTTG AAAGACAGAA GTTAGCCCAC
ACCACGGACT ACTACATCCA AAGAAAGAAG CTCGTGGATT ACGCGAGTTA CGCAAAGACA
ACCCACAAGT TCAAGGTTTA CGACTAG
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| Protein sequence | MHTGIIGWGS YVPKYRIKVS DIASVWGKEE GVVKALGLTE KSVPAADEDS TTMAIEASRD
ALTRAMIDPR EVEMALFGSE SKVYAVKSTS AILIDALGLS KFSLTADLEF ACRAASAGLR
MAFSMVESGQ VSYSLVVGSD TAQSNPGDVL ELSSAAAAVA FVVGRAEEAS AVVEASTSYV
TDTPDFWRRD GMPYPLHGEA FTGEPAYFAH IYEAVNRLLQ DTGLKVSDFD YFVFHQPNGK
FPFQMAKKLG VPLEKVKQGM VSTLIGNPYN ASALLGFARV LDVAKPGQRV LVAPFGSGAG
SDAYSFVITD KILERQKLAH TTDYYIQRKK LVDYASYAKT THKFKVYD
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