| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | LGAS_1372 |
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| Symbol | |
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| ID | 4439423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Lactobacillus gasseri ATCC 33323 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008530 |
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| Strand | - |
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| Start bp | 1368571 |
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| End bp | 1369734 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639673205 |
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| Product | 3-hydroxy-3-methylglutaryl CoA synthase |
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| Protein accession | YP_815172 |
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| Protein GI | 116630000 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
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| TIGRFAM ID | [TIGR01835] 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.998569 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.00000000102593 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGGTTG GAATTGATCA AATCGGATAT TTTACTCCAA ATAAGTATGT AGACATGGTA
GATTTGGCTC ATGCACGAAA CCAAGATCCA AATAAATTTT TAATTGGAAT TGGTCAAAAA
AAGATGAGCG TGGCTGATCC AACTCAAGAT GCAGTTTCAA TGGGAATTAA TGCAACACTA
CGGTATATAG ATAAAATTGA CCAATCAAAG GTAGGTCTTT TAATTTTTGG TACTGAAAGC
AGTGTTGACC AATCTAAATC AGGTTCTTTA TTTGTAAAAT CAGCTTTAAA ACTTGATCCA
GCTGTTAGGG CTTTTGAAGT TAAAGAAGCT TGCTTTGGGT TAACAGCAGG ATTAATGATT
GCTCAAGACT TTGTACGACT TCATCCTGAT CAAACTGCAA TTGTTATCGG TAGTGATATT
GCTCGCTATG GGATCAATAC GGCTGGTGAA GTTACTCAAG GAGCAGGAAG TGTTAGTTTA
TTAGTTTCTA GCAATCCAAG AATTCTAGAG CTTAATGAAG GTCATAGCGC CTATAGTGAA
GATATTAATG ATTTTTGGCG CCCCAACTAT TCAAAAACTG CTAAAGTTGA TGGAAAATAT
TCAACTCAAG TTTATTTGGA CTTTTTTAAA CATACTTTTT CTGATTATAA GAGACAAAAA
GGACTTGAGA CAAAAGACTT TGCTGCTATT GCATATCATT TGCCTTTTAC TAAGATGGGG
TTGAAGGCTA ATCGTTTAGC TATTGAGGGA GTAGATGAAG AAACAAATGC TCGTTTAATG
GATAGTTTTA CTGCGTCTAA AGAATTAAAT GCCAATGTCG GTAATATTTA TACTGGATCC
TTATACTTAA GTTTACTTAG TTTACTTGAG AATGGTGGCT TAAAGGCTGG CGATTTAATT
GGATTATTTT CTTATGGCTC AGGGGCTATG GCCGAATTTT ATTCAGCAAA TGTGGTTGAA
GGATATGAGA ATGAGCTTGA TAAGGCGGCT GACGAGGCAC TATTAGATAA AAGAAGAAAG
TTAAGTGTTC CTGAATATGA GAAAATCTTT TCAGCAAGTT TAGTAGATCC TCAAAATAAT
GTTGAACTTA CTAGCGATGA AAAAAAAGGC AGATACTATT TTGCTGGAAT TTGTGACGAT
ATTCGTCAAT ATAGAGTTAA ATAG
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| Protein sequence | MKVGIDQIGY FTPNKYVDMV DLAHARNQDP NKFLIGIGQK KMSVADPTQD AVSMGINATL
RYIDKIDQSK VGLLIFGTES SVDQSKSGSL FVKSALKLDP AVRAFEVKEA CFGLTAGLMI
AQDFVRLHPD QTAIVIGSDI ARYGINTAGE VTQGAGSVSL LVSSNPRILE LNEGHSAYSE
DINDFWRPNY SKTAKVDGKY STQVYLDFFK HTFSDYKRQK GLETKDFAAI AYHLPFTKMG
LKANRLAIEG VDEETNARLM DSFTASKELN ANVGNIYTGS LYLSLLSLLE NGGLKAGDLI
GLFSYGSGAM AEFYSANVVE GYENELDKAA DEALLDKRRK LSVPEYEKIF SASLVDPQNN
VELTSDEKKG RYYFAGICDD IRQYRVK
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