Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II1670 |
Symbol | |
ID | 3845354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | - |
Start bp | 1997172 |
End bp | 1998428 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637838971 |
Product | polyketide biosynthesis protein |
Protein accession | YP_439864 |
Protein GI | 83716712 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.130518 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGGTCG GTATTGAGGC CATGAACGTC TACGGCGGAT CGGCCGCGCT CGACGTGAGC GAGCTCGCGC GCCACCGCAA GCTCGACATG TCGCGTTTCG CGAATCTGCT GATGCGCGAG AAGGCGGTGG CGCTGCCGTT CGAGGACCCG ATCACGTTCG GCGTCAACGC GGCGAAGCCG ATCGTCGACG CGCTGTCGGA CGCCGAGCGC GAGCGCATCG AGATGCTGAT CACGTGCACC GAATCGGGCA TCGATTTCGG CAAGTCGATC AGCACCTACC TGCATCACCA TCTCGGCCTG AACCGCAACT GCCGGCTGTT CGAGGTCAAG CAGGCGTGCT ATTCGGGCAC GGCCGGCTTC CAGACGGCCG TGAACTTCAT CCTGTCGCAG ACCTCGCCGG GCGCGAAGGC GCTCGTCGTC GCCACCGACA TCTCGCGCTT CATGGTCGTC GAAGGCGGCG ACGCGATCTC CGAGGACTGG TCGTTCGCCG AGCCGAGCGC GGGCGCGGGC GCCGTCGCGA TGCTCGTGAG CGACGCGCCC GCCGTGTTCC AGCTCGACGT CGGCGCGCAC GGCTATTACG GCTACGAGGT GATGGACACG TGCCGGCCGG TGCCGGACAG CGAGGCGGGC GATTCGGACC TGTCGCTGAT GTCGTATCTC GAATGCTGCG AGCGCGCGTG GGGCGAGTAT GCGAGCCGCG TCACGGGCGC CGACTATCGG AACACGTTCC AGTACCTCGC GTTCCATACG CCGTTCGGCG GAATGGTCAA GGGCGCGCAT CGCAGCATGA TGCGCAAGGT CGTGCGCGCG CGCGCCGACG AGGCCGAAGC CGATTTCGTC GCGCGCGTCG AGCCGGGGCT CGCGTATTGC CAGCGCGTCG CGAACGTGAT GGGCGCGACC GTGTTTCTGT CGCTCGCGAG CACGATCGAC CACGGCGATT TTTCGACGCC CAGGCGCATC GGGCTCTTCT CGTACGGCTC CGGCTGCTGC TCGGAGTTCT TCAGCGGCGT GGTCACGCAG GAAGGGCAGC GCCGGCTCGC CGCGATGCGC ATCGGGCAGC AGCTCGACGC GCGCTACCGC CTCTCGCTCG CCGAGTACGA CGCGCTGCTG CTCGGCAGCG GGGCGGTCCG GTTCGGCACG CGCAACGTCG AGCTCGGCGC GTCGCTGCTG CCCGGCCCGC GCGCGATGCT CGCCGGCAAG AACCGTCTCG TGCTCGCGCG CATCCGCGAA TTCCACCGCG AGTACGTCTG GTCATGA
|
Protein sequence | MPVGIEAMNV YGGSAALDVS ELARHRKLDM SRFANLLMRE KAVALPFEDP ITFGVNAAKP IVDALSDAER ERIEMLITCT ESGIDFGKSI STYLHHHLGL NRNCRLFEVK QACYSGTAGF QTAVNFILSQ TSPGAKALVV ATDISRFMVV EGGDAISEDW SFAEPSAGAG AVAMLVSDAP AVFQLDVGAH GYYGYEVMDT CRPVPDSEAG DSDLSLMSYL ECCERAWGEY ASRVTGADYR NTFQYLAFHT PFGGMVKGAH RSMMRKVVRA RADEAEADFV ARVEPGLAYC QRVANVMGAT VFLSLASTID HGDFSTPRRI GLFSYGSGCC SEFFSGVVTQ EGQRRLAAMR IGQQLDARYR LSLAEYDALL LGSGAVRFGT RNVELGASLL PGPRAMLAGK NRLVLARIRE FHREYVWS
|
| |