283 homologs were found in PanDaTox collection
for query gene Cpin_1903 on replicon NC_013132
Organism: Chitinophaga pinensis DSM 2588



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013132  Cpin_1903  Holliday junction resolvase YqgF  100 
 
 		 136 aa  278  2e-74  Chitinophaga pinensis DSM 2588  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014230  CA2559_06155  Holliday junction resolvase-like protein  68.42 
 
 		 135 aa  182  1.0000000000000001e-45  Croceibacter atlanticus HTCC2559  Bacteria  normal  1  n/a   
 
 
-
 
NC_013162  Coch_1395  Holliday junction resolvase YqgF  61.19 
 
 		 143 aa  176  1e-43  Capnocytophaga ochracea DSM 7271  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_2528  Holliday junction resolvase-like protein  61.03 
 
 		 138 aa  174  5e-43  Flavobacterium johnsoniae UW101  Bacteria  normal  0.551236  n/a   
 
 
-
 
NC_013730  Slin_5430  Holliday junction resolvase YqgF  57.46 
 
 		 142 aa  156  7e-38  Spirosoma linguale DSM 74  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013061  Phep_0074  Holliday junction resolvase YqgF  54.07 
 
 		 138 aa  151  4e-36  Pedobacter heparinus DSM 2366  Bacteria  normal  0.974882  normal  1 
 
 
-
 
NC_013037  Dfer_4051  Holliday junction resolvase YqgF  52.21 
 
 		 137 aa  150  5e-36  Dyadobacter fermentans DSM 18053  Bacteria  normal  1  hitchhiker  0.00000789262 
 
 
-
 
NC_008255  CHU_0692  Holliday junction resolvase-like protein  51.47 
 
 		 152 aa  146  7e-35  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  1  normal  0.458381 
 
 
-
 
NC_002950  PG2202  Holliday junction resolvase-like protein  51.08 
 
 		 138 aa  145  2.0000000000000003e-34  Porphyromonas gingivalis W83  Bacteria  n/a    normal  1 
 
 
-
 
NC_010830  Aasi_1327  Holliday junction resolvase-like protein  48.15 
 
 		 141 aa  135  1e-31  Candidatus Amoebophilus asiaticus 5a2  Bacteria  n/a    normal  0.513618 
 
 
-
 
NC_010831  Cphamn1_2429  Holliday junction resolvase YqgF  42.96 
 
 		 144 aa  112  1.0000000000000001e-24  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008639  Cpha266_2570  Holliday junction resolvase YqgF  43.94 
 
 		 142 aa  107  5e-23  Chlorobium phaeobacteroides DSM 266  Bacteria  hitchhiker  0.00347975  n/a   
 
 
-
 
NC_010803  Clim_2406  Holliday junction resolvase YqgF  39.55 
 
 		 142 aa  100  5e-21  Chlorobium limicola DSM 245  Bacteria  normal  0.406379  n/a   
 
 
-
 
NC_011059  Paes_2162  Holliday junction resolvase YqgF  39.69 
 
 		 142 aa  99.4  2e-20  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.337322  normal  1 
 
 
-
 
NC_013501  Rmar_0873  Holliday junction resolvase YqgF  38.81 
 
 		 145 aa  97.4  6e-20  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_007512  Plut_2047  Holliday junction resolvase YqgF  36.84 
 
 		 141 aa  92.4  2e-18  Chlorobium luteolum DSM 273  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007514  Cag_0014  Holliday junction resolvase YqgF  35.82 
 
 		 140 aa  92.4  2e-18  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.639301  n/a   
 
 
-
 
NC_011060  Ppha_2805  Holliday junction resolvase YqgF  35.82 
 
 		 145 aa  91.3  4e-18  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_0153  Holliday junction resolvase-like protein  34.78 
 
 		 141 aa  84  7e-16  Clostridium thermocellum ATCC 27405  Bacteria  normal  0.0185653  n/a   
 
 
-
 
NC_010718  Nther_1778  Holliday junction resolvase YqgF  35.07 
 
 		 141 aa  83.2  0.000000000000001  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  1  normal  0.140554 
 
 
-
 
NC_008009  Acid345_0556  Holliday junction resolvase YqgF  36.23 
 
 		 153 aa  80.1  0.000000000000008  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.901255  normal  0.0480752 
 
 
-
 
NC_011661  Dtur_1024  Holliday junction resolvase YqgF  36.76 
 
 		 141 aa  80.5  0.000000000000008  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_05800  Holliday junction resolvase YqgF  33.81 
 
 		 140 aa  77  0.00000000000009  Halothermothrix orenii H 168  Bacteria  normal  0.209228  n/a   
 
 
-
 
NC_013522  Taci_1032  Holliday junction resolvase YqgF  30.66 
 
 		 142 aa  76.3  0.0000000000002  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_2239  Holliday junction resolvase-like protein  35.56 
 
 		 142 aa  75.9  0.0000000000002  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.0000140275  n/a   
 
 
-
 
NC_007644  Moth_1640  Holliday junction resolvase YqgF  32.84 
 
 		 140 aa  74.3  0.0000000000005  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.278901  normal  0.163549 
 
 
-
 
NC_008261  CPF_2031  Holliday junction resolvase-like protein  36.3 
 
 		 137 aa  73.6  0.0000000000008  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_008262  CPR_1748  Holliday junction resolvase-like protein  36.3 
 
 		 137 aa  73.6  0.0000000000008  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_3713  Holliday junction resolvase YqgF  33.58 
 
 		 146 aa  73.6  0.0000000000009  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0658941  hitchhiker  0.00476179 
 
 
-
 
NC_009523  RoseRS_3225  Holliday junction resolvase YqgF  33.58 
 
 		 141 aa  73.2  0.000000000001  Roseiflexus sp. RS-1  Bacteria  normal  0.387387  normal  1 
 
 
-
 
NC_013517  Sterm_2739  Holliday junction resolvase YqgF  34.06 
 
 		 137 aa  72.4  0.000000000002  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_013161  Cyan8802_1969  Holliday junction resolvase-like protein  34.03 
 
 		 139 aa  71.2  0.000000000005  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.0212683 
 
 
-
 
NC_011726  PCC8801_1942  Holliday junction resolvase-like protein  34.03 
 
 		 139 aa  71.2  0.000000000005  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008346  Swol_0470  Holliday junction resolvase YqgF  33.58 
 
 		 141 aa  70.5  0.000000000007  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.00000000599692  n/a   
 
 
-
 
NC_007413  Ava_3804  Holliday junction resolvase-like protein  34.09 
 
 		 151 aa  70.5  0.000000000008  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0796335  normal  1 
 
 
-
 
NC_013171  Apre_0938  Holliday junction resolvase YqgF  32.39 
 
 		 139 aa  70.1  0.000000000009  Anaerococcus prevotii DSM 20548  Bacteria  normal  1  n/a   
 
 
-
 
NC_011729  PCC7424_3098  Holliday junction resolvase-like protein  34.81 
 
 		 151 aa  69.7  0.00000000001  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  1 
 
 
-
 
NC_008530  LGAS_0423  Holliday junction resolvase-like protein  29.93 
 
 		 143 aa  70.1  0.00000000001  Lactobacillus gasseri ATCC 33323  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009513  Lreu_0535  Holliday junction resolvase-like protein  28.68 
 
 		 147 aa  68.2  0.00000000004  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000331559  n/a   
 
 
-
 
NC_009972  Haur_3633  Holliday junction resolvase YqgF  36.17 
 
 		 158 aa  67  0.00000000008  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_0775  Holliday junction resolvase YqgF  29.41 
 
 		 137 aa  66.6  0.0000000001  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.00000000463594  n/a   
 
 
-
 
NC_007947  Mfla_2100  Holliday junction resolvase-like protein  33.08 
 
 		 146 aa  66.2  0.0000000001  Methylobacillus flagellatus KT  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012793  GWCH70_2488  Holliday junction resolvase YqgF  29.5 
 
 		 138 aa  65.9  0.0000000002  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000680199  n/a   
 
 
-
 
NC_013174  Jden_1350  Holliday junction resolvase YqgF  27.21 
 
 		 167 aa  64.7  0.0000000004  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014248  Aazo_4148  Holliday junction resolvase YqgF  31.85 
 
 		 158 aa  64.7  0.0000000004  'Nostoc azollae' 0708  Bacteria  normal  0.927535  n/a   
 
 
-
 
NC_008148  Rxyl_1360  Holliday junction resolvase YqgF  31.58 
 
 		 139 aa  64.7  0.0000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0122615  n/a   
 
 
-
 
NC_013203  Apar_0458  Holliday junction resolvase YqgF  33.33 
 
 		 140 aa  63.9  0.0000000006  Atopobium parvulum DSM 20469  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011830  Dhaf_3562  Holliday junction resolvase-like protein  30.3 
 
 		 142 aa  63.9  0.0000000007  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000000000000329746  n/a   
 
 
-
 
NC_009921  Franean1_1695  Holliday junction resolvase-like protein  32.35 
 
 		 188 aa  63.5  0.0000000008  Frankia sp. EAN1pec  Bacteria  normal  0.0458229  normal  0.165399 
 
 
-
 
NC_013889  TK90_2407  Holliday junction resolvase YqgF  31.85 
 
 		 130 aa  63.2  0.000000001  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.664688  normal  0.90932 
 
 
-
 
NC_013757  Gobs_3157  Holliday junction resolvase YqgF  32.33 
 
 		 222 aa  62.8  0.000000001  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.588989  n/a   
 
 
-
 
NC_007604  Synpcc7942_2398  Holliday junction resolvase-like protein  31.85 
 
 		 149 aa  62.4  0.000000002  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0366153  hitchhiker  0.00151496 
 
 
-
 
NC_011884  Cyan7425_2514  Holliday junction resolvase-like protein  31.65 
 
 		 150 aa  62  0.000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.36708  normal  1 
 
 
-
 
NC_007777  Francci3_3213  Holliday junction resolvase-like protein  30.66 
 
 		 202 aa  62.4  0.000000002  Frankia sp. CcI3  Bacteria  normal  0.0825611  normal  1 
 
 
-
 
NC_013411  GYMC61_0964  Holliday junction resolvase YqgF  30.22 
 
 		 138 aa  62  0.000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007404  Tbd_2580  Holliday junction resolvase-like protein  33.09 
 
 		 145 aa  62  0.000000003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  0.0863234 
 
 
-
 
NC_007298  Daro_3892  Holliday junction resolvase-like protein  29.71 
 
 		 146 aa  61.2  0.000000004  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010184  BcerKBAB4_4233  Holliday junction resolvase-like protein  29.79 
 
 		 137 aa  61.2  0.000000004  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000272031  n/a   
 
 
-
 
NC_009674  Bcer98_3099  Holliday junction resolvase-like protein  30.5 
 
 		 137 aa  60.8  0.000000005  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00212776  n/a   
 
 
-
 
NC_009338  Mflv_3762  Holliday junction resolvase YqgF  32.64 
 
 		 175 aa  60.8  0.000000006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  0.454353 
 
 
-
 
NC_008146  Mmcs_2347  Holliday junction resolvase-like protein  30.77 
 
 		 169 aa  60.8  0.000000006  Mycobacterium sp. MCS  Bacteria  normal  0.502005  n/a   
 
 
-
 
NC_008705  Mkms_2394  Holliday junction resolvase-like protein  30.77 
 
 		 169 aa  60.8  0.000000006  Mycobacterium sp. KMS  Bacteria  normal  1  normal  0.345644 
 
 
-
 
NC_013223  Dret_1130  Holliday junction resolvase YqgF  32.35 
 
 		 142 aa  60.8  0.000000007  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010655  Amuc_1191  Holliday junction resolvase YqgF  28.57 
 
 		 141 aa  60.5  0.000000007  Akkermansia muciniphila ATCC BAA-835  Bacteria  hitchhiker  0.0000237997  normal  1 
 
 
-
 
NC_010730  SYO3AOP1_0474  Holliday junction resolvase YqgF  32.59 
 
 		 145 aa  60.1  0.000000009  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.00800439  n/a   
 
 
-
 
NC_009077  Mjls_2388  Holliday junction resolvase-like protein  28.57 
 
 		 169 aa  59.7  0.00000001  Mycobacterium sp. JLS  Bacteria  normal  1  normal  0.0472019 
 
 
-
 
NC_011831  Cagg_0094  Holliday junction resolvase YqgF  30.15 
 
 		 142 aa  59.7  0.00000001  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.0018567  normal  1 
 
 
-
 
NC_011901  Tgr7_2911  Holliday junction resolvase YqgF  30.15 
 
 		 163 aa  60.1  0.00000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.816073  n/a   
 
 
-
 
NC_013205  Aaci_2024  Holliday junction resolvase YqgF  26.81 
 
 		 144 aa  59.7  0.00000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.330713  n/a   
 
 
-
 
NC_002976  SERP1180  Holliday junction resolvase-like protein  27.54 
 
 		 142 aa  58.9  0.00000002  Staphylococcus epidermidis RP62A  Bacteria  normal  1  n/a   
 
 
-
 
NC_013216  Dtox_2265  Holliday junction resolvase YqgF  28.15 
 
 		 139 aa  58.9  0.00000002  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  1  hitchhiker  0.0000233904 
 
 
-
 
NC_010320  Teth514_1491  Holliday junction resolvase-like protein  29.93 
 
 		 139 aa  59.3  0.00000002  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.0000000000748947  n/a   
 
 
-
 
NC_011725  BCB4264_A4506  Holliday junction resolvase-like protein  29.08 
 
 		 137 aa  58.9  0.00000002  Bacillus cereus B4264  Bacteria  normal  0.860088  n/a   
 
 
-
 
NC_013172  Bfae_16350  conserved hypothetical protein TIGR00250  27.21 
 
 		 181 aa  59.3  0.00000002  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_011772  BCG9842_B0730  Holliday junction resolvase-like protein  29.08 
 
 		 137 aa  58.5  0.00000003  Bacillus cereus G9842  Bacteria  decreased coverage  0.0000000542239  normal  1 
 
 
-
 
NC_006055  Mfl464  Holliday junction resolvase  27.66 
 
 		 142 aa  58.9  0.00000003  Mesoplasma florum L1  Bacteria  normal  0.564085  n/a   
 
 
-
 
NC_009953  Sare_1820  Holliday junction resolvase YqgF  32.37 
 
 		 153 aa  58.9  0.00000003  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.0000610168 
 
 
-
 
NC_013173  Dbac_1790  Holliday junction resolvase YqgF  33.09 
 
 		 133 aa  58.5  0.00000003  Desulfomicrobium baculatum DSM 4028  Bacteria  decreased coverage  0.00751815  n/a   
 
 
-
 
NC_013947  Snas_3877  Holliday junction resolvase YqgF  30.77 
 
 		 151 aa  58.5  0.00000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.843962  normal  1 
 
 
-
 
NC_003909  BCE_4469  Holliday junction resolvase-like protein  28.37 
 
 		 137 aa  58.2  0.00000004  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.000000240455  n/a   
 
 
-
 
NC_005945  BAS4282  Holliday junction resolvase-like protein  28.37 
 
 		 137 aa  58.2  0.00000004  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000000036093  n/a   
 
 
-
 
NC_005957  BT9727_4119  Holliday junction resolvase-like protein  28.37 
 
 		 137 aa  58.2  0.00000004  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  decreased coverage  3.61572e-18  n/a   
 
 
-
 
NC_006274  BCZK4130  Holliday junction resolvase-like protein  28.37 
 
 		 137 aa  58.2  0.00000004  Bacillus cereus E33L  Bacteria  unclonable  0.000000000000238321  n/a   
 
 
-
 
NC_012669  Bcav_2015  Holliday junction resolvase YqgF  30.15 
 
 		 163 aa  58.2  0.00000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.756916  normal  0.07881 
 
 
-
 
NC_007530  GBAA_4614  Holliday junction resolvase-like protein  28.37 
 
 		 137 aa  58.2  0.00000004  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  decreased coverage  0.0000000000846091  n/a   
 
 
-
 
NC_008312  Tery_4379  Holliday junction resolvase-like protein  28.89 
 
 		 149 aa  58.2  0.00000004  Trichodesmium erythraeum IMS101  Bacteria  normal  0.556882  normal  0.251804 
 
 
-
 
NC_011773  BCAH820_4466  Holliday junction resolvase-like protein  28.37 
 
 		 137 aa  58.2  0.00000004  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.0000283196 
 
 
-
 
NC_006368  lpp0637  Holliday junction resolvase-like protein  30.6 
 
 		 139 aa  57.8  0.00000005  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl0621  Holliday junction resolvase-like protein  30.6 
 
 		 139 aa  57.8  0.00000005  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_011658  BCAH187_A4519  Holliday junction resolvase-like protein  28.37 
 
 		 137 aa  57.8  0.00000005  Bacillus cereus AH187  Bacteria  hitchhiker  0.000203205  n/a   
 
 
-
 
NC_013204  Elen_2554  Holliday junction resolvase YqgF  26.28 
 
 		 138 aa  57.4  0.00000006  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_2641  Holliday junction resolvase YqgF  27.34 
 
 		 175 aa  57.4  0.00000007  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008532  STER_1938  Holliday junction resolvase-like protein  27.34 
 
 		 139 aa  57  0.00000008  Streptococcus thermophilus LMD-9  Bacteria  unclonable  0.0000000471473  n/a   
 
 
-
 
NC_014212  Mesil_0224  Holliday junction resolvase YqgF  27.94 
 
 		 135 aa  57  0.00000009  Meiothermus silvanus DSM 9946  Bacteria  normal  0.776353  normal  0.0108713 
 
 
-
 
NC_010571  Oter_3530  Holliday junction resolvase YqgF  32.12 
 
 		 145 aa  56.6  0.0000001  Opitutus terrae PB90-1  Bacteria  normal  0.390146  normal  1 
 
 
-
 
NC_008228  Patl_1154  Holliday junction resolvase YqgF  31.62 
 
 		 143 aa  56.2  0.0000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_008309  HS_0010  Holliday junction resolvase-like protein  32.59 
 
 		 141 aa  56.6  0.0000001  Haemophilus somnus 129PT  Bacteria  normal  1  n/a   
 
 
-
 
NC_009727  CBUD_2194  Holliday junction resolvase-like protein  28.15 
 
 		 141 aa  55.8  0.0000002  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.401443  n/a   
 
 
-
 
NC_010117  COXBURSA331_A2220  Holliday junction resolvase-like protein  28.15 
 
 		 141 aa  55.5  0.0000002  Coxiella burnetii RSA 331  Bacteria  hitchhiker  0.0000000031992  n/a   
 
 
-
 
NC_013515  Smon_0417  Holliday junction resolvase YqgF  28.68 
 
 		 142 aa  55.5  0.0000002  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
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