More than 300 homologs were found in PanDaTox collection
for query gene Suden_1058 on replicon NC_007575
Organism: Sulfurimonas denitrificans DSM 1251



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007575  Suden_1058  response regulator receiver domain-containing protein  100 
 
 
181 aa  355  1.9999999999999998e-97  Sulfurimonas denitrificans DSM 1251  Bacteria  decreased coverage  0.0000718409  n/a   
 
 
-
 
NC_013512  Sdel_0893  diguanylate cyclase  39.57 
 
 
566 aa  99  3e-20  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_0968  response regulator receiver domain-containing protein  40.65 
 
 
317 aa  95.1  5e-19  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.730939  n/a   
 
 
-
 
NC_007575  Suden_0969  response regulator receiver domain-containing protein  39.02 
 
 
328 aa  93.2  2e-18  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.749991  n/a   
 
 
-
 
NC_010814  Glov_3210  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  30.71 
 
 
425 aa  92.4  3e-18  Geobacter lovleyi SZ  Bacteria  normal  0.141244  n/a   
 
 
-
 
NC_009714  CHAB381_1362  DNA-binding response regulator  38.18 
 
 
225 aa  87  1e-16  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_1219  response regulator receiver sensor signal transduction histidine kinase  32.82 
 
 
396 aa  86.7  2e-16  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.0000364001 
 
 
-
 
NC_003912  CJE1664  DNA-binding response regulator  35.48 
 
 
226 aa  85.9  3e-16  Campylobacter jejuni RM1221  Bacteria  normal  0.690265  n/a   
 
 
-
 
NC_009483  Gura_0876  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  33.83 
 
 
709 aa  85.9  3e-16  Geobacter uraniireducens Rf4  Bacteria  normal  0.0730078  n/a   
 
 
-
 
NC_008787  CJJ81176_1483  DNA-binding response regulator  36.29 
 
 
226 aa  85.9  3e-16  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2195  multi-sensor signal transduction histidine kinase  30.66 
 
 
502 aa  85.5  4e-16  Geobacter sp. M21  Bacteria  n/a    normal  0.067402 
 
 
-
 
NC_008346  Swol_1041  response regulator receiver protein  34.35 
 
 
365 aa  84.3  7e-16  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2024  multi-sensor signal transduction histidine kinase  32.82 
 
 
517 aa  84.3  8e-16  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_4377  multi-sensor signal transduction histidine kinase  32.12 
 
 
636 aa  83.2  0.000000000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1837  DNA-binding response regulator  34.68 
 
 
226 aa  81.6  0.000000000000005  Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.591446  n/a   
 
 
-
 
NC_008599  CFF8240_0377  DNA-binding response regulator  36.97 
 
 
226 aa  80.1  0.00000000000002  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.306284  n/a   
 
 
-
 
NC_013512  Sdel_0892  response regulator receiver  31.25 
 
 
233 aa  80.1  0.00000000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2098  multi-sensor signal transduction histidine kinase  31.91 
 
 
547 aa  79.3  0.00000000000003  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.000413163 
 
 
-
 
NC_013385  Adeg_2019  response regulator receiver protein  42.27 
 
 
123 aa  78.6  0.00000000000004  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_3739  response regulator receiver sensor signal transduction histidine kinase  32.56 
 
 
379 aa  79  0.00000000000004  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007575  Suden_0987  response regulator receiver domain-containing protein  33.07 
 
 
420 aa  78.2  0.00000000000006  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_2120  multi-sensor signal transduction histidine kinase  30.43 
 
 
547 aa  77.8  0.00000000000007  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_2943  response regulator receiver modulated diguanylate cyclase  35.38 
 
 
438 aa  77.4  0.0000000000001  Magnetococcus sp. MC-1  Bacteria  normal  0.641955  normal 
 
 
-
 
NC_007575  Suden_0964  two component transcriptional regulator  33.33 
 
 
258 aa  76.3  0.0000000000002  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.412408  n/a   
 
 
-
 
NC_007575  Suden_0984  response regulator receiver/GGDEF/EAL domain-containing protein  33.33 
 
 
564 aa  76.6  0.0000000000002  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1991  two component transcriptional regulator  31.01 
 
 
229 aa  76.3  0.0000000000003  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.656084  n/a   
 
 
-
 
NC_013512  Sdel_1920  response regulator receiver  31.03 
 
 
226 aa  75.9  0.0000000000003  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0329  two component transcriptional regulator, winged helix family  35.16 
 
 
231 aa  75.9  0.0000000000003  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_1558  response regulator receiver protein  29.79 
 
 
566 aa  75.5  0.0000000000004  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_2620  two component, sigma54 specific, Fis family transcriptional regulator  30.15 
 
 
532 aa  75.1  0.0000000000005  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.0658498  normal 
 
 
-
 
NC_010320  Teth514_0399  response regulator receiver protein  32.8 
 
 
365 aa  74.3  0.0000000000008  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_2277  two component transcriptional regulator  25.97 
 
 
248 aa  73.9  0.000000000001  Salinispora arenicola CNS-205  Bacteria  normal  0.113906  normal  0.0109188 
 
 
-
 
NC_011146  Gbem_2122  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  26.28 
 
 
953 aa  73.9  0.000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  0.0111685  n/a   
 
 
-
 
NC_013173  Dbac_2828  response regulator receiver sensor signal transduction histidine kinase  30.36 
 
 
410 aa  73.6  0.000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_0005  response regulator receiver domain-containing protein  33.33 
 
 
229 aa  73.9  0.000000000001  Campylobacter concisus 13826  Bacteria  normal  0.0566865  n/a   
 
 
-
 
NC_011146  Gbem_3634  response regulator receiver sensor signal transduction histidine kinase  31.78 
 
 
379 aa  73.9  0.000000000001  Geobacter bemidjiensis Bem  Bacteria  normal  0.0261897  n/a   
 
 
-
 
NC_012034  Athe_2159  response regulator receiver protein  34.78 
 
 
120 aa  72.8  0.000000000002  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.00200925  n/a   
 
 
-
 
NC_008532  STER_1116  DNA-binding response regulator  29.03 
 
 
235 aa  72.4  0.000000000003  Streptococcus thermophilus LMD-9  Bacteria  normal  0.310768  n/a   
 
 
-
 
NC_014212  Mesil_1066  two component transcriptional regulator, winged helix family  30.97 
 
 
222 aa  72.4  0.000000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009051  Memar_0237  response regulator receiver sensor signal transduction histidine kinase  33.03 
 
 
440 aa  72  0.000000000004  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_009616  Tmel_0931  response regulator receiver protein  41.57 
 
 
120 aa  71.6  0.000000000005  Thermosipho melanesiensis BI429  Bacteria  normal  0.252152  n/a   
 
 
-
 
NC_011899  Hore_16930  response regulator receiver protein  37.61 
 
 
117 aa  72  0.000000000005  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2130  response regulator receiver  25.32 
 
 
252 aa  71.6  0.000000000006  Salinispora tropica CNB-440  Bacteria  normal  0.539517  hitchhiker  0.00279069 
 
 
-
 
NC_009719  Plav_2214  response regulator receiver protein  29.41 
 
 
165 aa  71.2  0.000000000007  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.151552  normal 
 
 
-
 
NC_013411  GYMC61_2129  response regulator receiver protein  41.18 
 
 
118 aa  71.2  0.000000000007  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008700  Sama_2952  sensory box histidine kinase/response regulator  29.01 
 
 
1763 aa  71.2  0.000000000007  Shewanella amazonensis SB2B  Bacteria  normal  0.684028  normal  0.230032 
 
 
-
 
NC_011884  Cyan7425_1062  response regulator receiver protein  33.05 
 
 
120 aa  70.9  0.000000000009  Cyanothece sp. PCC 7425  Bacteria  normal  0.58489  hitchhiker  0.0000344775 
 
 
-
 
NC_013946  Mrub_0031  two component transcriptional regulator, winged helix family  29.31 
 
 
234 aa  70.9  0.000000000009  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0280  Fis family transcriptional regulator  34.29 
 
 
450 aa  70.5  0.00000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.928901  n/a   
 
 
-
 
NC_009802  CCC13826_0722  response regulator receiver domain-containing protein  31.01 
 
 
227 aa  70.9  0.00000000001  Campylobacter concisus 13826  Bacteria  normal  0.0554017  n/a   
 
 
-
 
NC_007575  Suden_0837  two component transcriptional regulator  35.43 
 
 
269 aa  70.9  0.00000000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1880  two component transcriptional regulator  29.23 
 
 
223 aa  70.5  0.00000000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2096  response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  25.55 
 
 
953 aa  70.5  0.00000000001  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000903564 
 
 
-
 
NC_007947  Mfla_1762  periplasmic sensor hybrid histidine kinase  31.67 
 
 
1146 aa  70.5  0.00000000001  Methylobacillus flagellatus KT  Bacteria  normal  0.468259  normal 
 
 
-
 
NC_013172  Bfae_20650  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  27.14 
 
 
231 aa  70.9  0.00000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0260682  n/a   
 
 
-
 
NC_013512  Sdel_1234  EAL domain protein  30 
 
 
589 aa  70.5  0.00000000001  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.89994  n/a   
 
 
-
 
NC_002939  GSU0149  sensor histidine kinase/response regulator  30.37 
 
 
371 aa  70.1  0.00000000002  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1516  two component transcriptional regulator  31.09 
 
 
218 aa  69.7  0.00000000002  Thermosipho melanesiensis BI429  Bacteria  normal  0.346089  n/a   
 
 
-
 
NC_009715  CCV52592_1144  two component transcriptional regulator  28.66 
 
 
225 aa  69.7  0.00000000002  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_2701  response regulator receiver protein  35.05 
 
 
120 aa  70.1  0.00000000002  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000335112  n/a   
 
 
-
 
NC_013922  Nmag_2877  response regulator receiver protein  29.06 
 
 
118 aa  69.7  0.00000000002  Natrialba magadii ATCC 43099  Archaea  normal  0.412079  n/a   
 
 
-
 
NC_008528  OEOE_0105  DNA-binding response regulator  31.13 
 
 
237 aa  69.7  0.00000000002  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_0956  DNA-binding response regulator  29.03 
 
 
223 aa  70.1  0.00000000002  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.504019  n/a   
 
 
-
 
NC_009654  Mmwyl1_2625  two component transcriptional regulator  23.97 
 
 
232 aa  69.7  0.00000000002  Marinomonas sp. MWYL1  Bacteria  normal  unclonable  0.00000000000561273 
 
 
-
 
NC_007575  Suden_0208  response regulator receiver domain-containing protein  34.4 
 
 
564 aa  69.3  0.00000000003  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_013501  Rmar_0589  response regulator receiver modulated serine phosphatase  31.3 
 
 
371 aa  69.3  0.00000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  0.420228  n/a   
 
 
-
 
NC_009972  Haur_1267  response regulator receiver sensor signal transduction histidine kinase  29.1 
 
 
542 aa  69.3  0.00000000003  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_1448  response regulator receiver protein  32.46 
 
 
129 aa  68.9  0.00000000003  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.637441  n/a   
 
 
-
 
NC_009483  Gura_0224  response regulator receiver sensor signal transduction histidine kinase  29.92 
 
 
379 aa  69.3  0.00000000003  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4321  two component transcriptional regulator  29.69 
 
 
248 aa  69.3  0.00000000003  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.173505 
 
 
-
 
NC_010814  Glov_1899  response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor  25.76 
 
 
616 aa  68.9  0.00000000004  Geobacter lovleyi SZ  Bacteria  normal  0.764058  n/a   
 
 
-
 
NC_009784  VIBHAR_05293  hypothetical protein  27.2 
 
 
237 aa  68.9  0.00000000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_013522  Taci_0090  two component transcriptional regulator, winged helix family  27.74 
 
 
228 aa  68.6  0.00000000004  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1555  two component, sigma54 specific, Fis family transcriptional regulator  28.57 
 
 
467 aa  68.6  0.00000000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.21045  n/a   
 
 
-
 
NC_007760  Adeh_4240  two component, sigma54 specific, Fis family transcriptional regulator  29.84 
 
 
469 aa  68.9  0.00000000004  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2398  two component, sigma54 specific, transcriptional regulator, Fis family  27.52 
 
 
469 aa  68.6  0.00000000004  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.313034  n/a   
 
 
-
 
NC_011145  AnaeK_2310  two component, sigma54 specific, transcriptional regulator, Fis family  27.52 
 
 
469 aa  68.6  0.00000000004  Anaeromyxobacter sp. K  Bacteria  normal  0.294968  n/a   
 
 
-
 
NC_008541  Arth_2712  two component transcriptional regulator  28.46 
 
 
224 aa  68.9  0.00000000004  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.00552555  n/a   
 
 
-
 
NC_008751  Dvul_2709  response regulator receiver sensor signal transduction histidine kinase  31.43 
 
 
501 aa  68.9  0.00000000004  Desulfovibrio vulgaris DP4  Bacteria  normal  0.710197  normal  0.745824 
 
 
-
 
NC_004116  SAG0719  DNA-binding response regulator  26.61 
 
 
236 aa  68.6  0.00000000005  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0951718  n/a   
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  31.13 
 
 
455 aa  68.6  0.00000000005  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_009675  Anae109_2258  two component, sigma54 specific, Fis family transcriptional regulator  27.52 
 
 
468 aa  68.6  0.00000000005  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.428008  normal  0.0222917 
 
 
-
 
NC_007964  Nham_0129  multi-sensor hybrid histidine kinase  30.83 
 
 
752 aa  68.6  0.00000000005  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_0115  response regulator receiver modulated diguanylate cyclase  26.11 
 
 
304 aa  68.6  0.00000000005  Pelobacter propionicus DSM 2379  Bacteria  normal  0.113218  n/a   
 
 
-
 
NC_013512  Sdel_0705  response regulator receiver  31.58 
 
 
231 aa  68.2  0.00000000006  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.00025775  n/a   
 
 
-
 
NC_007492  Pfl01_5610  response regulator receiver domain-containing protein  31.82 
 
 
318 aa  68.2  0.00000000006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.368186 
 
 
-
 
NC_007517  Gmet_0202  response regulator receiver sensor signal transduction histidine kinase  31.93 
 
 
374 aa  68.2  0.00000000006  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00101669 
 
 
-
 
NC_007777  Francci3_0321  two component transcriptional regulator  27.97 
 
 
406 aa  68.2  0.00000000006  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_1404  response regulator receiver protein  35.19 
 
 
119 aa  68.2  0.00000000006  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_2139  response regulator receiver  28.57 
 
 
236 aa  68.2  0.00000000006  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_0363  response regulator receiver  27.27 
 
 
228 aa  68.2  0.00000000006  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_1869  NAD(P)H-flavin oxidoreductase  30.36 
 
 
229 aa  68.2  0.00000000006  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_4207  two component transcriptional regulator, winged helix family  29.13 
 
 
247 aa  67.8  0.00000000007  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_010001  Cphy_1583  two component AraC family transcriptional regulator  31.45 
 
 
533 aa  68.2  0.00000000007  Clostridium phytofermentans ISDg  Bacteria  normal  0.160886  n/a   
 
 
-
 
NC_011898  Ccel_2316  response regulator receiver protein  37.89 
 
 
121 aa  67.8  0.00000000007  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_2740  two component, sigma54 specific, transcriptional regulator, Fis family  31.34 
 
 
475 aa  68.2  0.00000000007  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_007406  Nwi_1334  response regulator receiver  30.15 
 
 
181 aa  67.8  0.00000000008  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.117946  normal 
 
 
-
 
NC_008346  Swol_2412  response regulator receiver protein  32.46 
 
 
123 aa  67.8  0.00000000008  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.18168  n/a   
 
 
-
 
NC_012669  Bcav_0840  two component transcriptional regulator, winged helix family  26.05 
 
 
241 aa  67.8  0.00000000008  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.214337  normal  0.533835 
 
 
-
 
NC_011891  A2cp1_2835  two component, sigma54 specific, transcriptional regulator, Fis family  31.34 
 
 
475 aa  67.8  0.00000000009  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.019348  n/a   
 
 
-
 
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