| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CCC13826_0005 |
|---|
| Symbol | |
|---|
| ID | 5595986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter concisus 13826 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009802 |
|---|
| Strand | - |
|---|
| Start bp | 1989686 |
|---|
| End bp | 1990375 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640930530 |
|---|
| Product | response regulator receiver domain-containing protein |
|---|
| Protein accession | YP_001467795 |
|---|
| Protein GI | 157164314 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0566865 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAGG CGTTAGAAAT TTTAAAAAAA GTATCTATCT TAGTGGCCGA AGATGACGAG
ATGGCAAGGG AGCTCATCAT CACTGGACTT AAGCCATACT GTGATCAAGT CGTAGGTGCA
AAAGATGGGC AAGATGGGCT GGAGAAATTT AAAAAACAGG GCTTTGACAT CGTGATGAGC
GACATTCACA TGCCAGTGTT AAATGGCTTT GAGATGATGA ATGAGATAAA AAAGCTAAAG
CCTCATCAGA AATTTATCGT CTTTACCTCG TATGATAGCG ATGAAAATTT GATCAAGAGC
TATGAGCAGG GGGCGACCTT GTTTTTGAAA AAGCCTATCG ATATAAAGGA TCTTAGATCG
ATGCTAATAA GCCTAAGCTT TGACCGAGAT GAGAAGCTAG TGCGCTTAAG TGATGAGGTG
AGCATAAATT TAAAAAGAGA GAAAATTTAT AAAAATGGCA ATGAGCTATA CCTTAGCTTT
TTGCAAAATA AGATATTTTG GCTATTTGCT TACAACCTAA ACAAGCTCGT GACTTACGAG
ATGATAGAGG AGTTTGTCTA TGAGAGCACC GAGGTGAGCA AGGCTGCTAT ACAAAATGTC
GTTTTACGCC TAAAACGCGA GCTTGGCGTG AAATTTAAAA ACATCAGCGA GAGTGGGTAT
ATCTTAGTCG CTGAATGCAA AAAAGCATAA
|
|---|
| Protein sequence | MQEALEILKK VSILVAEDDE MARELIITGL KPYCDQVVGA KDGQDGLEKF KKQGFDIVMS
DIHMPVLNGF EMMNEIKKLK PHQKFIVFTS YDSDENLIKS YEQGATLFLK KPIDIKDLRS
MLISLSFDRD EKLVRLSDEV SINLKREKIY KNGNELYLSF LQNKIFWLFA YNLNKLVTYE
MIEEFVYEST EVSKAAIQNV VLRLKRELGV KFKNISESGY ILVAECKKA
|
|---|
| |