| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0129 |
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| Symbol | |
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| ID | 4029571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 145259 |
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| End bp | 147517 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637968663 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_575490 |
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| Protein GI | 92115761 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCGC GATTGTTCTG GATCAGGGCC CGTCTGCGCC GATTGATCCG ACGACATCCC
CGGCTGCATC TAGCTTTTCG GACCGTCACG ACTTTCTCGA TCGCGTTCGG GGGCGCCTAC
GGCTTCGTTT CCGGAAGCAG AAGTGCCGAT TACGACCCGA ACGCCTTTGC AATCGGCGTG
AGCTTCCTGT TCGCGCTGGC GTGTGTCGCG TTAGCGATCC TGAGCATGCG CTTGCGCTGG
ATGCGCAGAA AGCTTCGCAA GATCTCCCTT CACAATGAAA CGCTCGCGGA CCGGAATTGG
GAGTTGAAGG AAGCGGAGGA ACGAGCACGT AGCCTCTTCG AATCGCAAGA CGATCTGATC
GTTCTGCGCA ACGCGGACGG TCTTATCACC TCGGTCAACG ACGCATATTG TGTTCTGGCT
CAGCGATCGC GGGCGGATTT GCTCGGCAGC CGGTTCGCGC TCCCCGTTCT TGAGCAGGGT
GAGAGCGCGA TTGAATCGAA CGGCACGCGC ATCCACGATC AACGCGTCGA AACCGCGCTC
GGTCCGCGCT GGATTGCGTG GCGCGAAGGC CTCGTGCGGA TCGACGCCAA CCATCCGGCG
GAACTGCAAT GCGTCGGCCG CGATGTCACC AACCGAACCG AGACCGAGTA CGCGCTCGGT
GAAGCACGAG ATCACGCGAA CGCGGCCAAC CGGGCCAAAT CGCGCTTCCT GGCGATGACC
TCGCACGAGA TTCGTACGCC GCTGAACGGC ATTATCGGCA TGAGCGGATT GTTGCTCGAC
ACCTCGCTCA CACCCGAACA GACGACATAC GTCAAGGCGG TCAAGGCGTC CGGCGACGCA
CTGCTGTCGC TGATCGAGGA ATTGCTCGAC TATTCCAGGA TCGAAGCCGG CAAGATCGAC
CTTGAAAGCC GTCCTTTCAT CCTGTCCGAC CTGATCGAGG ACATTACCGA ACTGCTGGCG
CCGCGTGCGC AGGCGCGGCA ACTCGAAATC GCCGCCTATA TCGACGAGCA GTTGCCGATC
GAGGTGATCG GAGACGCCAC ACGATTGCGC CAGATCCTGC TCAATCTTGC GGGAAATGCC
ATCAAGTTTA CGCCGTCCGG CGGCGTCGCG CTGATCGTCG AGCCCGGTAC CGAGCCGGGA
ACCATCCGTT TCATGGTTCA GGACACTGGC ATCGGCATTA CGCCGGACGC GCAGGCGCGG
GTTTTCCGTG AGTTCGAACA AGCCGACGAA CAAATAGCGC GCAACTACGG CGGAACGGGA
TTGGGATTGA GTATCAGCGA TCGCATCGTC AAGCGGATGG GCGGACGCAT CACGCTCGAG
AGCAAACCGG GTGCCGGTTC GACATTCGAG GTGTCGATAC CCCTCCCCGC TCACGACAGC
CCACCTGAGC GAAAGCGCTT CTCCACGCCG GATCTGACAG GACACCCGAT CATGCTGGTG
GCCCCCCAAA CCATCGAGGC GTCGCTGCTT GCCCGGCGGC TGGAGCGATG GGGCGCCGAG
ACCTGCACGA TATCGGACAT CGCTGTTGCC CACGCCCTGC TTCCGGGGCG GCCGTGGCAC
ACCGTGCTCG TCGATCATGC CATGGGCGCG GAGGATGTCT GGCGGCTCGG TCAGACCGCA
TGCCGGCACG CGGCGCGGCG GATCGTCATG GTCACGCCGT CGACTCGGCA TGACCTTCAG
ACCCCCGGCG CGGGGGCGTT TACCGGCTAC CTGGTCAAGC CTCTGCGAAC CGCGTCGATC
GCGGCGCGAT TGGCGGCGAC GGCCGACGGC CCGACCGCGC TCCGGGCAAC CGAAGGCCGG
CATGATTGCA ATACTCTCGA AGAGTCCGAG GCGCCGACCA CGGCGCCCAC GCAAAGCCTT
TCGATCCTCG TGGCGGAGGA CAATGAGATC AACGCGTTAT TGATACGCTC GCTCCTGACC
CGCCTTGGAC ACGACGTGAT CCTCGCCGCA AACGGCGAGA AAGCACTTGA ATCATGGGTC
GCCGCCGGAA CAGCGGGTGC GCCCTACGAT CTCGTTTTGA TGGACGTGCA GATGCCTAAA
CTCGACGGCG TCGAGACCAC CAAGAGAATT CGCGAACGGG AAGCCGGCCA GCGCGGCAGC
CGCACGACCA TTCTGGCGCT GACGGCCAAC GCGCTGCTTG ACGATCGTTC TGCCTGCTTC
GAGGCCGGCA TGGATGGCTT TCTCGTTAAA CCGCTCGATC GGGACAAACT GGCCGACGCG
CTTGCGGGAT TGATGGCGGC CCGTCACATC CCGGCCTGA
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| Protein sequence | MMARLFWIRA RLRRLIRRHP RLHLAFRTVT TFSIAFGGAY GFVSGSRSAD YDPNAFAIGV
SFLFALACVA LAILSMRLRW MRRKLRKISL HNETLADRNW ELKEAEERAR SLFESQDDLI
VLRNADGLIT SVNDAYCVLA QRSRADLLGS RFALPVLEQG ESAIESNGTR IHDQRVETAL
GPRWIAWREG LVRIDANHPA ELQCVGRDVT NRTETEYALG EARDHANAAN RAKSRFLAMT
SHEIRTPLNG IIGMSGLLLD TSLTPEQTTY VKAVKASGDA LLSLIEELLD YSRIEAGKID
LESRPFILSD LIEDITELLA PRAQARQLEI AAYIDEQLPI EVIGDATRLR QILLNLAGNA
IKFTPSGGVA LIVEPGTEPG TIRFMVQDTG IGITPDAQAR VFREFEQADE QIARNYGGTG
LGLSISDRIV KRMGGRITLE SKPGAGSTFE VSIPLPAHDS PPERKRFSTP DLTGHPIMLV
APQTIEASLL ARRLERWGAE TCTISDIAVA HALLPGRPWH TVLVDHAMGA EDVWRLGQTA
CRHAARRIVM VTPSTRHDLQ TPGAGAFTGY LVKPLRTASI AARLAATADG PTALRATEGR
HDCNTLEESE APTTAPTQSL SILVAEDNEI NALLIRSLLT RLGHDVILAA NGEKALESWV
AAGTAGAPYD LVLMDVQMPK LDGVETTKRI REREAGQRGS RTTILALTAN ALLDDRSACF
EAGMDGFLVK PLDRDKLADA LAGLMAARHI PA
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