Gene Pfl01_5610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_5610 
Symbol 
ID3717686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp6282565 
End bp6283521 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content63% 
IMG OID 
Productresponse regulator receiver domain-containing protein 
Protein accessionYP_351338 
Protein GI77461831 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.368186 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGA TCAGTGTGTT GGTCGTGGAC GATGCATCGT TCATTCGTGA CCTGGTGAAA 
AAGTGCCTGC GTAATTACTT CCCGGGGATT CGCACCGAGG ACGCCATCAA CGGCAAGAAG
GCCCAGGCCA TGCTGGCCAA GGAAGCCTTC GACCTGGTGC TGTGCGACTG GGAAATGCCG
GAAATGTCCG GCCTCGAACT GCTGACCTGG TGCCGTGAGC AGGACAATCT CAAGACCATG
CCGTTCATCA TGGTTACCAG CCGTGGCGAC AAGGAAAACG TCGTGCAGGC GATCCAGGCC
GGCGTCACCG GTTACGTCAG CAAACCGTTC ACCAACGAGC AACTGCTGAC CAAGGTCAAA
CAGGCTCTGA ACAAGGTCGG CAAGCTCGAC ACCCTGATGA ACAGCGCCCC GACCAAGATG
AACTCGGCGT TCGGCAACGA CTCCCTGAGC GCGTTGACCG GTGGCAAGGC TGCCGTGGTC
GGTTCCGCAC CCGCTGCTGC TGCGGCCAAC CCGTTTGCCA AGCCTGCCGC GGCGGCCCCG
GCACCTGCCG CCGCGCCACA GCGTGGCCTG CTCAACAGCC CGCCGGTGAA AGCTCCGGCA
GCCTCCAGCG CTCCGGCCGG TGGTCGCGGT CAGGGCCAAC TGCGCTTGCC GAGCGGCACC
CAGCAATGCG TGATCAAGGC CCTGAGCATC AAGGAAGCGC TGCTGGTGGT GAAACGCACC
GACACCCTGC CGCAGATCCT CGACAGCGCC GTGCTCGATC TGGAGCAGGG CGACAACGCC
GAAATCGCCC GCCTCAACGG CTACCTGCAC GCCGTCGTTG CCCACGAGCC GAAACCCGAC
AGCGACTGGC TGCAACTGAC CTTCCGCTTC GTCGACCAGG ACGCGCAGAA GCTCGACTAC
ATCTCCCGCC TGATTGCTCG CGGTACGGCG CAGAAGCACT TCGTACCGGG CGCTTGA
 
Protein sequence
MSKISVLVVD DASFIRDLVK KCLRNYFPGI RTEDAINGKK AQAMLAKEAF DLVLCDWEMP 
EMSGLELLTW CREQDNLKTM PFIMVTSRGD KENVVQAIQA GVTGYVSKPF TNEQLLTKVK
QALNKVGKLD TLMNSAPTKM NSAFGNDSLS ALTGGKAAVV GSAPAAAAAN PFAKPAAAAP
APAAAPQRGL LNSPPVKAPA ASSAPAGGRG QGQLRLPSGT QQCVIKALSI KEALLVVKRT
DTLPQILDSA VLDLEQGDNA EIARLNGYLH AVVAHEPKPD SDWLQLTFRF VDQDAQKLDY
ISRLIARGTA QKHFVPGA