More than 300 homologs were found in PanDaTox collection
for query gene Sbal223_1858 on replicon NC_011663
Organism: Shewanella baltica OS223



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011663  Sbal223_1858  two component transcriptional regulator, LuxR family  100 
 
 
220 aa  448  1e-125  Shewanella baltica OS223  Bacteria  decreased coverage  0.00870294  decreased coverage  1.66193e-09 
 
 
-
 
NC_009052  Sbal_2493  two component LuxR family transcriptional regulator  99.09 
 
 
220 aa  446  1e-124  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_2486  two component LuxR family transcriptional regulator  99.09 
 
 
220 aa  446  1e-124  Shewanella baltica OS185  Bacteria  normal  0.637953  n/a   
 
 
-
 
NC_009997  Sbal195_2606  two component LuxR family transcriptional regulator  98.64 
 
 
220 aa  446  1e-124  Shewanella baltica OS195  Bacteria  hitchhiker  0.00642184  hitchhiker  0.00275886 
 
 
-
 
NC_008321  Shewmr4_1588  two component LuxR family transcriptional regulator  91.36 
 
 
220 aa  415  1e-115  Shewanella sp. MR-4  Bacteria  normal  0.0618082  normal  0.0591517 
 
 
-
 
NC_008577  Shewana3_1732  two component LuxR family transcriptional regulator  90.45 
 
 
220 aa  414  1e-115  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.0049943  normal  0.183248 
 
 
-
 
NC_008322  Shewmr7_1663  two component LuxR family transcriptional regulator  90.91 
 
 
220 aa  413  1e-115  Shewanella sp. MR-7  Bacteria  normal  0.0154836  unclonable  1.52825e-05 
 
 
-
 
NC_004347  SO_2648  LuxR family DNA-binding response regulator  91.32 
 
 
220 aa  416  1e-115  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2247  two component LuxR family transcriptional regulator  91.36 
 
 
220 aa  398  1e-110  Shewanella putrefaciens CN-32  Bacteria  normal  0.998494  n/a   
 
 
-
 
NC_008345  Sfri_2305  two component transcriptional regulator, LuxR family protein  83.64 
 
 
220 aa  392  1e-108  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2076  response regulator receiver protein  83.64 
 
 
238 aa  386  1e-106  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_1545  two component LuxR family transcriptional regulator  81.74 
 
 
219 aa  374  1e-103  Shewanella loihica PV-4  Bacteria  normal  0.505974  normal 
 
 
-
 
NC_009901  Spea_2554  two component LuxR family transcriptional regulator  82.19 
 
 
219 aa  376  1e-103  Shewanella pealeana ATCC 700345  Bacteria  normal  0.958854  n/a   
 
 
-
 
NC_009831  Ssed_1867  two component LuxR family transcriptional regulator  82.19 
 
 
219 aa  367  1e-101  Shewanella sediminis HAW-EB3  Bacteria  hitchhiker  0.00198288  hitchhiker  0.000309651 
 
 
-
 
NC_010506  Swoo_2721  two component LuxR family transcriptional regulator  79.91 
 
 
219 aa  364  1e-100  Shewanella woodyi ATCC 51908  Bacteria  normal  hitchhiker  0.001499 
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  56.56 
 
 
221 aa  253  2e-66  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2824  transcriptional regulator, LuxR response regulator receiver  60.48 
 
 
209 aa  232  4e-60  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4027  DNA-binding response regulator, LuxR family  55.5 
 
 
215 aa  230  1e-59  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_38490  Response regulator, LuxR family  56.94 
 
 
215 aa  229  2e-59  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_03258  two-component system regulatory protein  53.59 
 
 
222 aa  227  1e-58  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1384  LuxR response regulator receiver  55.5 
 
 
215 aa  227  1e-58  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  58.05 
 
 
209 aa  226  2e-58  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_007963  Csal_0866  two component LuxR family transcriptional regulator  53.33 
 
 
220 aa  225  3e-58  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0852  two component LuxR family transcriptional regulator  51.89 
 
 
224 aa  224  8e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.852842  normal  0.596615 
 
 
-
 
NC_003910  CPS_0179  LuxR family DNA-binding response regulator  56.73 
 
 
219 aa  223  1e-57  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2614  two component LuxR family transcriptional regulator  53.21 
 
 
222 aa  222  3e-57  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1291  two component LuxR family transcriptional regulator  52.88 
 
 
215 aa  222  3e-57  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009783  VIBHAR_00157  transcriptional regulator LuxR  56.94 
 
 
211 aa  218  5e-56  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  51.67 
 
 
221 aa  218  5e-56  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  53.81 
 
 
216 aa  218  7e-56  Pseudomonas putida W619  Bacteria  normal  hitchhiker  1.36895e-06 
 
 
-
 
NC_009656  PSPA7_1537  putative two-component response regulator  52.36 
 
 
217 aa  218  8e-56  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_17670  LuxR family transcriptional regulator  52.36 
 
 
217 aa  218  8e-56  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_1635  LuxR family two component transcriptional regulator  52.86 
 
 
216 aa  216  2e-55  Pseudomonas putida KT2440  Bacteria  normal  normal  0.0994806 
 
 
-
 
NC_009512  Pput_4082  two component LuxR family transcriptional regulator  52.86 
 
 
216 aa  216  2e-55  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1237  two component LuxR family transcriptional regulator  52.86 
 
 
216 aa  214  6e-55  Pseudomonas putida GB-1  Bacteria  normal  hitchhiker  3.17123e-09 
 
 
-
 
NC_007492  Pfl01_1182  two component LuxR family transcriptional regulator  53.33 
 
 
216 aa  214  8e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.192356 
 
 
-
 
NC_013456  VEA_002211  transcriptional regulator LuxR family  56.8 
 
 
209 aa  212  3e-54  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  50.49 
 
 
221 aa  212  4e-54  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  49.51 
 
 
221 aa  210  2e-53  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  49.28 
 
 
224 aa  209  3e-53  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_3140  two component LuxR family transcriptional regulator  51.38 
 
 
220 aa  208  4e-53  Shewanella sediminis HAW-EB3  Bacteria  normal  0.803361  normal  0.270175 
 
 
-
 
NC_007925  RPC_4822  two component LuxR family transcriptional regulator  53.4 
 
 
223 aa  208  5e-53  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0836  LuxR family two component transcriptional regulator  53.33 
 
 
224 aa  207  7e-53  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0588074 
 
 
-
 
NC_007778  RPB_4565  two component LuxR family transcriptional regulator  53.88 
 
 
224 aa  206  2e-52  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.156913  normal 
 
 
-
 
NC_011004  Rpal_0920  two component transcriptional regulator, LuxR family  53.88 
 
 
225 aa  206  3e-52  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.491034  n/a   
 
 
-
 
NC_009667  Oant_0408  two component LuxR family transcriptional regulator  52.38 
 
 
214 aa  201  7e-51  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.82136  n/a   
 
 
-
 
NC_010577  XfasM23_0261  two component LuxR family transcriptional regulator  49.03 
 
 
210 aa  199  4e-50  Xylella fastidiosa M23  Bacteria  normal  0.574059  n/a   
 
 
-
 
NC_007964  Nham_0273  two component LuxR family transcriptional regulator  51.17 
 
 
231 aa  198  5e-50  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0290  response regulator receiver protein  49.03 
 
 
210 aa  198  6e-50  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0164  two component LuxR family transcriptional regulator  50.24 
 
 
215 aa  198  7e-50  Sinorhizobium medicae WSM419  Bacteria  normal  0.523755  normal 
 
 
-
 
NC_004310  BR0315  LuxR family DNA-binding response regulator  49.05 
 
 
213 aa  195  5e-49  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0331  LuxR family DNA-binding response regulator  48.57 
 
 
213 aa  194  1e-48  Brucella ovis ATCC 25840  Bacteria  normal  0.338839  n/a   
 
 
-
 
NC_008345  Sfri_1828  two component transcriptional regulator, LuxR family protein  48.57 
 
 
216 aa  191  9e-48  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_3356  two component transcriptional regulator, LuxR family  50.24 
 
 
216 aa  189  2e-47  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.334369  normal 
 
 
-
 
NC_010717  PXO_02404  transcriptional regulator LuxR/uhpA family  46.23 
 
 
218 aa  189  4e-47  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_011989  Avi_0584  two component response regulator  49.53 
 
 
215 aa  187  1e-46  Agrobacterium vitis S4  Bacteria  normal  0.566414  n/a   
 
 
-
 
NC_011369  Rleg2_0190  two component transcriptional regulator, LuxR family  47.91 
 
 
215 aa  187  2e-46  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_0937  LuxR family DNA-binding response regulator  45.89 
 
 
223 aa  184  8e-46  Colwellia psychrerythraea 34H  Bacteria  normal  0.715087  n/a   
 
 
-
 
NC_011138  MADE_00712  putative regulator in two-component regulatory system ; LuxR family protein  47.39 
 
 
214 aa  184  9e-46  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.169527  n/a   
 
 
-
 
NC_008322  Shewmr7_0664  two component LuxR family transcriptional regulator  42.92 
 
 
223 aa  184  1e-45  Shewanella sp. MR-7  Bacteria  normal  normal  0.358413 
 
 
-
 
NC_008254  Meso_0091  two component LuxR family transcriptional regulator  49.52 
 
 
218 aa  184  1e-45  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_4028  two component LuxR family transcriptional regulator  43.06 
 
 
212 aa  183  2e-45  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3459  two component LuxR family transcriptional regulator  43.19 
 
 
223 aa  183  2e-45  Shewanella sp. ANA-3  Bacteria  normal  0.306063  normal  0.532773 
 
 
-
 
NC_012850  Rleg_0219  two component transcriptional regulator, LuxR family  49.29 
 
 
215 aa  182  2e-45  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.463895 
 
 
-
 
NC_008321  Shewmr4_3283  two component LuxR family transcriptional regulator  43.19 
 
 
223 aa  181  5e-45  Shewanella sp. MR-4  Bacteria  normal  normal  0.335218 
 
 
-
 
NC_003910  CPS_3420  LuxR family DNA-binding response regulator  47.44 
 
 
216 aa  181  6e-45  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3170  two component transcriptional regulator, LuxR family protein  42.45 
 
 
227 aa  181  8e-45  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0522  response regulator receiver protein  42.92 
 
 
223 aa  181  1e-44  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.211294 
 
 
-
 
NC_008228  Patl_1981  two component LuxR family transcriptional regulator  44.17 
 
 
213 aa  177  1e-43  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.607794  n/a   
 
 
-
 
NC_011992  Dtpsy_0029  two component transcriptional regulator, LuxR family  46.89 
 
 
214 aa  175  6e-43  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_0011  two component LuxR family transcriptional regulator  46.89 
 
 
214 aa  175  6e-43  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4192  two component transcriptional regulator, LuxR family  42.92 
 
 
251 aa  174  7e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.270399  n/a   
 
 
-
 
NC_008228  Patl_0522  two component LuxR family transcriptional regulator  46.23 
 
 
219 aa  174  9e-43  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02260  Response regulator, LuxR family (CheY, HTH domains)  43.38 
 
 
222 aa  174  9e-43  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02155  putative regulator in two-component regulatory system ; LuxR family protein  43.26 
 
 
211 aa  174  1e-42  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_2061  two component transcriptional regulator, LuxR family  44.55 
 
 
224 aa  173  2e-42  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.737796  normal 
 
 
-
 
NC_010511  M446_2941  two component LuxR family transcriptional regulator  42.01 
 
 
251 aa  172  5e-42  Methylobacterium sp. 4-46  Bacteria  normal  0.80826  normal  0.0563961 
 
 
-
 
NC_009654  Mmwyl1_3005  two component LuxR family transcriptional regulator  46.92 
 
 
217 aa  171  9e-42  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00815247  normal 
 
 
-
 
NC_010002  Daci_2921  two component LuxR family transcriptional regulator  45.93 
 
 
229 aa  166  2e-40  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.190475 
 
 
-
 
NC_010505  Mrad2831_2408  two component LuxR family transcriptional regulator  40.19 
 
 
219 aa  162  4e-39  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0426941  normal  0.882432 
 
 
-
 
NC_010725  Mpop_4737  two component transcriptional regulator, LuxR family  40.38 
 
 
241 aa  161  6e-39  Methylobacterium populi BJ001  Bacteria  normal  normal  0.0133592 
 
 
-
 
NC_010172  Mext_4220  response regulator receiver  40 
 
 
244 aa  157  9e-38  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.89842 
 
 
-
 
NC_011757  Mchl_4590  two component transcriptional regulator, LuxR family  40 
 
 
244 aa  157  9e-38  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.590508  normal  0.147521 
 
 
-
 
NC_009511  Swit_0694  two component LuxR family transcriptional regulator  43.41 
 
 
252 aa  154  1e-36  Sphingomonas wittichii RW1  Bacteria  normal  0.770061  normal  0.351457 
 
 
-
 
NC_008228  Patl_1870  two component LuxR family transcriptional regulator  36.45 
 
 
218 aa  152  5e-36  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0264  two component LuxR family transcriptional regulator  41.28 
 
 
221 aa  150  1e-35  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_0465  two component transcriptional regulator  36.84 
 
 
239 aa  146  3e-34  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_011666  Msil_2341  two component transcriptional regulator, LuxR family  42.86 
 
 
209 aa  140  1e-32  Methylocella silvestris BL2  Bacteria  n/a    normal  0.193906 
 
 
-
 
NC_007404  Tbd_2570  two component LuxR family transcriptional regulator  38.79 
 
 
224 aa  140  2e-32  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.282998  normal  0.225314 
 
 
-
 
NC_003910  CPS_1932  DNA-binding response regulator  33.64 
 
 
219 aa  139  3e-32  Colwellia psychrerythraea 34H  Bacteria  decreased coverage  0.00601791  n/a   
 
 
-
 
NC_004347  SO_3305  LuxR family DNA-binding response regulator  38.76 
 
 
206 aa  139  4e-32  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010506  Swoo_2245  two component LuxR family transcriptional regulator  40.47 
 
 
218 aa  138  6e-32  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00227369  normal  0.0543921 
 
 
-
 
NC_007794  Saro_2626  two component LuxR family transcriptional regulator  41.15 
 
 
207 aa  137  1e-31  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.390788  n/a   
 
 
-
 
NC_010524  Lcho_1574  two component LuxR family transcriptional regulator  38.32 
 
 
219 aa  137  1e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.347453 
 
 
-
 
NC_009620  Smed_3954  two component LuxR family transcriptional regulator  35.96 
 
 
229 aa  137  2e-31  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_3317  putative transcriptional regulator  36.84 
 
 
221 aa  135  3e-31  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_38930  putative transcriptional regulator  40.95 
 
 
221 aa  135  4e-31  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009952  Dshi_2674  two component transcriptional regulator  41.38 
 
 
228 aa  135  5e-31  Dinoroseobacter shibae DFL 12  Bacteria  decreased coverage  0.00219271  normal 
 
 
-
 
NC_007493  RSP_2882  two component LuxR family transcriptional regulator  42.16 
 
 
226 aa  135  5e-31  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.533901  n/a   
 
 
-
 
NC_002947  PP_2665  LuxR family two component transcriptional regulator  41.35 
 
 
221 aa  135  6e-31  Pseudomonas putida KT2440  Bacteria  normal  0.107491  normal 
 
 
-
 
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