295 homologs were found in PanDaTox collection
for query gene M446_1835 on replicon NC_010511
Organism: Methylobacterium sp. 4-46



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010511  M446_1835  cyclic nucleotide-binding protein  100 
 
 
281 aa  550  1e-155  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0073  cyclic nucleotide-binding  48.25 
 
 
255 aa  208  6e-53  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0783  cyclic nucleotide-binding  47.37 
 
 
376 aa  204  2e-51  Methylobacterium extorquens PA1  Bacteria  normal  0.0359827  normal 
 
 
-
 
NC_011757  Mchl_3385  transcriptional regulator, Crp/Fnr family  46.05 
 
 
384 aa  204  2e-51  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_0060  transcriptional regulator, Crp/Fnr family  46.05 
 
 
384 aa  200  1.9999999999999998e-50  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3862  transcriptional regulator, Crp/Fnr family  44.4 
 
 
249 aa  189  4e-47  Methylobacterium populi BJ001  Bacteria  normal  0.582037  normal  0.123136 
 
 
-
 
NC_010725  Mpop_0133  transcriptional regulator, Crp/Fnr family  43.72 
 
 
268 aa  182  5.0000000000000004e-45  Methylobacterium populi BJ001  Bacteria  normal  0.564261  normal  0.0379159 
 
 
-
 
NC_010725  Mpop_5417  transcriptional regulator, Crp/Fnr family  42.23 
 
 
298 aa  181  8.000000000000001e-45  Methylobacterium populi BJ001  Bacteria  normal  0.36754  normal 
 
 
-
 
NC_010172  Mext_4876  cyclic nucleotide-binding  42.31 
 
 
317 aa  177  2e-43  Methylobacterium extorquens PA1  Bacteria  normal  0.155933  normal 
 
 
-
 
NC_011757  Mchl_5361  transcriptional regulator, Crp/Fnr family  42.31 
 
 
299 aa  177  2e-43  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_1991  transcriptional regulator, Crp/Fnr family  43.12 
 
 
249 aa  174  9.999999999999999e-43  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.250977  n/a   
 
 
-
 
NC_010172  Mext_0772  cyclic nucleotide-binding  42.67 
 
 
254 aa  173  1.9999999999999998e-42  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3480  cyclic nucleotide-binding  47.45 
 
 
249 aa  173  2.9999999999999996e-42  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3788  transcriptional regulator, Crp/Fnr family  47.45 
 
 
249 aa  173  2.9999999999999996e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.371562 
 
 
-
 
NC_011757  Mchl_2990  transcriptional regulator, Crp/Fnr family  41.23 
 
 
244 aa  172  5e-42  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4270  CRP/FNR family transcriptional regulator  44.55 
 
 
225 aa  172  5e-42  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0893417 
 
 
-
 
NC_010172  Mext_2763  cyclic nucleotide-binding  41.23 
 
 
244 aa  172  5e-42  Methylobacterium extorquens PA1  Bacteria  normal  0.746131  normal 
 
 
-
 
NC_010505  Mrad2831_2433  Crp/FNR family transcriptional regulator  42.55 
 
 
247 aa  172  5e-42  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.168738  normal  0.817452 
 
 
-
 
NC_010505  Mrad2831_2950  Crp/FNR family transcriptional regulator  40.83 
 
 
250 aa  169  4e-41  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.908761  normal 
 
 
-
 
NC_010725  Mpop_2886  transcriptional regulator, Crp/Fnr family  40.35 
 
 
244 aa  168  1e-40  Methylobacterium populi BJ001  Bacteria  normal  0.473656  normal 
 
 
-
 
NC_011757  Mchl_2301  transcriptional regulator, Crp/Fnr family  43.66 
 
 
259 aa  167  2e-40  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.161686 
 
 
-
 
NC_010172  Mext_2024  cyclic nucleotide-binding  43.66 
 
 
259 aa  167  2e-40  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.996332 
 
 
-
 
NC_011757  Mchl_3389  transcriptional regulator, Crp/Fnr family  37.66 
 
 
248 aa  166  4e-40  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_7493  transcriptional regulator, Crp/Fnr family  41.48 
 
 
246 aa  161  1e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_7477  transcriptional regulator, Crp/Fnr family  41.92 
 
 
246 aa  160  2e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.403111  n/a   
 
 
-
 
NC_010511  M446_1230  Crp/FNR family transcriptional regulator  42.54 
 
 
263 aa  159  4e-38  Methylobacterium sp. 4-46  Bacteria  normal  0.583862  normal 
 
 
-
 
NC_010725  Mpop_1986  transcriptional regulator, Crp/Fnr family  39.02 
 
 
259 aa  159  5e-38  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6209  Crp/FNR family transcriptional regulator  40.26 
 
 
247 aa  159  6e-38  Methylobacterium sp. 4-46  Bacteria  normal  0.0102902  normal  0.673418 
 
 
-
 
NC_010510  Mrad2831_6249  Crp/FNR family transcriptional regulator  40 
 
 
281 aa  157  1e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.999867 
 
 
-
 
NC_011894  Mnod_3758  transcriptional regulator, Crp/Fnr family  41.13 
 
 
247 aa  157  2e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011893  Mnod_8765  putative transcriptional regulator, Crp/Fnr family  38.3 
 
 
244 aa  156  4e-37  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.474033  n/a   
 
 
-
 
NC_011894  Mnod_6130  putative transcriptional regulator, Crp/Fnr family  38.53 
 
 
244 aa  153  2.9999999999999998e-36  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_1441  Crp/FNR family transcriptional regulator  43.59 
 
 
259 aa  150  3e-35  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00010652 
 
 
-
 
NC_011894  Mnod_3167  transcriptional regulator, Crp/Fnr family  38.46 
 
 
307 aa  149  5e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_4497  transcriptional regulator, Crp/Fnr family  41.33 
 
 
255 aa  149  6e-35  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0140276  n/a   
 
 
-
 
NC_012850  Rleg_2944  transcriptional regulator, Crp/Fnr family  41.03 
 
 
246 aa  146  4.0000000000000006e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0738845  normal 
 
 
-
 
NC_011369  Rleg2_2686  transcriptional regulator, Crp/Fnr family  37.95 
 
 
239 aa  145  1e-33  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.038663  normal 
 
 
-
 
NC_010511  M446_4564  Crp/FNR family transcriptional regulator  38.53 
 
 
257 aa  143  4e-33  Methylobacterium sp. 4-46  Bacteria  normal  decreased coverage  0.00106309 
 
 
-
 
NC_010511  M446_6403  Crp/FNR family transcriptional regulator  39.39 
 
 
246 aa  142  7e-33  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3832  transcriptional regulator, Crp/Fnr family  36.52 
 
 
245 aa  142  8e-33  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4786  cyclic nucleotide-binding protein  38.5 
 
 
243 aa  141  9.999999999999999e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_4036  Crp/FNR family transcriptional regulator  41.09 
 
 
315 aa  140  1.9999999999999998e-32  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1439  Crp/FNR family transcriptional regulator  38.16 
 
 
243 aa  139  3.9999999999999997e-32  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.000118444 
 
 
-
 
NC_009485  BBta_2391  CRP/FNR family transcriptional regulator  36.4 
 
 
274 aa  139  4.999999999999999e-32  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1359  Crp/FNR family transcriptional regulator  39.13 
 
 
236 aa  137  2e-31  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.342582  normal  0.0135439 
 
 
-
 
NC_011894  Mnod_1427  putative transcriptional regulator, Crp/Fnr family  33.48 
 
 
267 aa  132  6.999999999999999e-30  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1184  transcriptional regulator, Crp/Fnr family  33.76 
 
 
243 aa  130  2.0000000000000002e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2367  putative transcriptional regulator, Crp/Fnr family  40.28 
 
 
255 aa  131  2.0000000000000002e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0615204  n/a   
 
 
-
 
NC_008254  Meso_1485  cyclic nucleotide-binding protein  32.75 
 
 
244 aa  129  4.0000000000000003e-29  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2447  cyclic nucleotide-binding protein  35.86 
 
 
255 aa  127  2.0000000000000002e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6056  Crp/FNR family transcriptional regulator  31.91 
 
 
241 aa  125  7e-28  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_4068  Crp/FNR family transcriptional regulator  31.17 
 
 
247 aa  122  8e-27  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.936766  normal 
 
 
-
 
NC_009485  BBta_0859  CRP/FNR family transcriptional regulator  32.89 
 
 
234 aa  120  1.9999999999999998e-26  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0477074 
 
 
-
 
NC_007958  RPD_3805  cyclic nucleotide-binding  31.6 
 
 
263 aa  119  3.9999999999999996e-26  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3741  transcriptional regulator, Crp/Fnr family  36.94 
 
 
242 aa  119  6e-26  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2609  Crp/FNR family transcriptional regulator  35.2 
 
 
293 aa  117  3e-25  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.325512  normal 
 
 
-
 
NC_009511  Swit_0953  CRP/FNR family transcriptional regulator  34.54 
 
 
254 aa  115  7.999999999999999e-25  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_007494  RSP_3616  Crp/FNR family transcriptional regulator  33.48 
 
 
243 aa  113  3e-24  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3486  putative signal transduction histidine kinase  32.46 
 
 
243 aa  111  1.0000000000000001e-23  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.173486 
 
 
-
 
NC_009049  Rsph17029_0604  cyclic nucleotide-binding protein  31.14 
 
 
246 aa  108  7.000000000000001e-23  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_5597  putative transcriptional regulator, Crp/Fnr family  35.91 
 
 
246 aa  108  8.000000000000001e-23  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0675352  n/a   
 
 
-
 
NC_007493  RSP_1953  Crp/FNR family transcriptional regulator  30.7 
 
 
246 aa  107  2e-22  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4822  cyclic nucleotide-binding protein  34.85 
 
 
243 aa  105  1e-21  Sinorhizobium medicae WSM419  Bacteria  normal  0.379105  normal  0.123433 
 
 
-
 
NC_007643  Rru_A1787  cyclic nucleotide-binding domain-containing protein  29.86 
 
 
263 aa  100  3e-20  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1734  Crp/FNR family transcriptional regulator  28.44 
 
 
241 aa  99.4  6e-20  Methylobacillus flagellatus KT  Bacteria  normal  0.79675  hitchhiker  0.000773544 
 
 
-
 
NC_009511  Swit_0955  CRP/FNR family transcriptional regulator  32.43 
 
 
226 aa  97.8  2e-19  Sphingomonas wittichii RW1  Bacteria  normal  0.869769  normal 
 
 
-
 
NC_010172  Mext_3499  CRP/FNR family transcriptional regulator  32.64 
 
 
286 aa  97.1  3e-19  Methylobacterium extorquens PA1  Bacteria  normal  0.519814  normal 
 
 
-
 
NC_008254  Meso_2575  Crp/FNR family transcriptional regulator  33.16 
 
 
240 aa  95.9  6e-19  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009956  Dshi_3844  cyclic nucleotide-binding protein  30.17 
 
 
242 aa  95.1  1e-18  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_1854  CRP/FNR family transcriptional regulator  27.19 
 
 
250 aa  95.1  1e-18  Marinobacter aquaeolei VT8  Bacteria  normal  0.191124  n/a   
 
 
-
 
NC_009636  Smed_2400  CRP/FNR family transcriptional regulator  31.44 
 
 
250 aa  93.6  3e-18  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0375093 
 
 
-
 
NC_007493  RSP_1275  Crp/Fnr family transcriptional regulator  29.46 
 
 
249 aa  93.6  3e-18  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_2705  cyclic nucleotide-binding protein  30.04 
 
 
249 aa  93.2  5e-18  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009049  Rsph17029_2934  cyclic nucleotide-binding protein  29.02 
 
 
249 aa  92.4  7e-18  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3367  CRP/FNR family transcriptional regulator  27.68 
 
 
252 aa  91.7  1e-17  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.184948  n/a   
 
 
-
 
NC_008686  Pden_2108  CRP/FNR family transcriptional regulator  32.93 
 
 
243 aa  90.9  2e-17  Paracoccus denitrificans PD1222  Bacteria  normal  0.819689  normal  0.0771917 
 
 
-
 
NC_011988  Avi_5989  transcriptional regulator CRP family  29.46 
 
 
257 aa  89.4  6e-17  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0266  CRP/FNR family transcriptional regulator  28.31 
 
 
253 aa  89.4  7e-17  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0532  cyclic nucleotide-binding protein  27.51 
 
 
276 aa  87  3e-16  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.053126  normal  0.207643 
 
 
-
 
NC_011369  Rleg2_1000  transcriptional regulator, Crp/Fnr family  27.93 
 
 
250 aa  86.3  5e-16  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.523077  normal  0.289991 
 
 
-
 
NC_009505  BOV_0189  Crp/FNR family transcriptional regulator  25.57 
 
 
235 aa  86.3  5e-16  Brucella ovis ATCC 25840  Bacteria  normal  0.338052  n/a   
 
 
-
 
NC_004311  BRA0414  Crp/FNR family transcriptional regulator  27.11 
 
 
252 aa  84.3  0.000000000000002  Brucella suis 1330  Bacteria  normal  0.766284  n/a   
 
 
-
 
NC_009504  BOV_A0357  Crp/FNR family transcriptional regulator  27.11 
 
 
252 aa  84.3  0.000000000000002  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2201  transcriptional regulator  29.31 
 
 
262 aa  83.6  0.000000000000003  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.586423 
 
 
-
 
NC_012791  Vapar_0997  transcriptional regulator, Crp/Fnr family  28.45 
 
 
230 aa  83.6  0.000000000000004  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0983  Crp/FNR family transcriptional regulator  28.99 
 
 
245 aa  82.8  0.000000000000006  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3865  Crp/FNR family transcriptional regulator  28.31 
 
 
252 aa  82.8  0.000000000000006  Chelativorans sp. BNC1  Bacteria  normal  0.925805  n/a   
 
 
-
 
NC_004310  BR0196  Crp/FNR family transcriptional regulator  25.11 
 
 
253 aa  82.4  0.000000000000007  Brucella suis 1330  Bacteria  normal  0.0367027  n/a   
 
 
-
 
NC_012850  Rleg_1153  transcriptional regulator, Crp/Fnr family  27.03 
 
 
250 aa  82.4  0.000000000000007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_3568  cyclic nucleotide-binding domain-containing protein  26.72 
 
 
242 aa  82.4  0.000000000000007  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4040  Crp/FNR family transcriptional regulator  29.79 
 
 
256 aa  80.9  0.00000000000002  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.858211 
 
 
-
 
NC_013889  TK90_1862  transcriptional regulator, Crp/Fnr family  29.47 
 
 
250 aa  79  0.00000000000008  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0720375  normal  0.182435 
 
 
-
 
NC_010511  M446_5658  cyclic nucleotide-binding protein  26.67 
 
 
245 aa  71.2  0.00000000002  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_007794  Saro_0490  CRP/FNR family transcriptional regulator  30.17 
 
 
256 aa  68.2  0.0000000002  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_0946  Crp/FNR family transcriptional regulator  31.18 
 
 
253 aa  67.8  0.0000000002  Methylobacterium sp. 4-46  Bacteria  normal  0.336903  normal 
 
 
-
 
NC_013456  VEA_003475  fumarate and nitrate reduction regulatory protein  23.7 
 
 
248 aa  67.8  0.0000000002  Vibrio sp. Ex25  Bacteria  normal  0.292896  n/a   
 
 
-
 
NC_011138  MADE_02063  transcriptional regulator of aerobic, anaerobic respiration, osmotic balance (CAMP-binding family) protein  22.22 
 
 
222 aa  67  0.0000000003  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.00714534  n/a   
 
 
-
 
NC_013889  TK90_0787  transcriptional regulator, Crp/Fnr family  26.15 
 
 
243 aa  66.6  0.0000000004  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_0319  Crp/FNR family transcriptional regulator  28.28 
 
 
262 aa  65.9  0.0000000007  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_007802  Jann_2207  cyclic nucleotide-binding domain-containing protein  21.07 
 
 
260 aa  65.9  0.0000000008  Jannaschia sp. CCS1  Bacteria  normal  0.363509  normal 
 
 
-
 
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