Gene BBta_6056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6056 
Symbol 
ID5155282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6277554 
End bp6278279 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content65% 
IMG OID640560768 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_001241889 
Protein GI148257304 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCGG ACAGGATCGT CGTCAACAAG CTCAAGGAAC ATTCCCGGTT GTCGAGCGAC 
GACATCGCCG AGATCAAGAC TCTCAGCTTC ACGCGGCGCG AGCTGGCCGG CCATGAAGAC
CTGATCAGGC AAGGCGACGA ACCTGACAAA TCCGTCGTGG TCATGTCCGG CTGGGTTGCG
CGCTATCATC TGCTCCGCAG CGGCGGGCGA CAATATCTCT CATTTCACAT GGCCGGCGAC
TGGCCGGACT CGCAGGCGCT GTTCCTCGAC CGCATGGACC ACGCGGTCTG CGCGATCGGC
TCTGCGGCGG TCGCGTCCGT TCAGCACAAG GAGCTGACGC GGGCGATCAG CCGGCGGCCG
TCGCTGGGTT TTGCGATCTG GCGCGAGACA CTGGTCGACG CGTCGATCTT TCGCGAGGCC
ATCACCAACA ACAGTGCGCG AGGCAAGCCG GCGCGCATGG CGCACCTGTT CTGCGAGCTG
TTCTACCGCG CCAAAGCGCT TGGCCATGTC GACGGCAACC TGCTGCAGCT GCCGGTCAGC
CTGATCCAGC TCGGCGAGGC GCTGGGCATG GCGATCGCGA CCGTCAACCG CACATTGGTC
GAGCTGCGCG CCAGCCGCGC GGTCGATTTC CGCAGCGGCA CGCTGGCGGT CTATCATTGG
CCACGGCTGT GCGCGATCGG CGAGTTCGAT CCCGGCTATC TGCATCTGAA AAGCCTGCCG
CGCTGA
 
Protein sequence
MDADRIVVNK LKEHSRLSSD DIAEIKTLSF TRRELAGHED LIRQGDEPDK SVVVMSGWVA 
RYHLLRSGGR QYLSFHMAGD WPDSQALFLD RMDHAVCAIG SAAVASVQHK ELTRAISRRP
SLGFAIWRET LVDASIFREA ITNNSARGKP ARMAHLFCEL FYRAKALGHV DGNLLQLPVS
LIQLGEALGM AIATVNRTLV ELRASRAVDF RSGTLAVYHW PRLCAIGEFD PGYLHLKSLP
R