233 homologs were found in PanDaTox collection
for query gene Mrad2831_2609 on replicon NC_010505
Organism: Methylobacterium radiotolerans JCM 2831



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010505  Mrad2831_2609  Crp/FNR family transcriptional regulator  100 
 
 
293 aa  593  1e-168  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.325512  normal 
 
 
-
 
NC_011757  Mchl_3389  transcriptional regulator, Crp/Fnr family  40.51 
 
 
248 aa  182  6e-45  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_1485  cyclic nucleotide-binding protein  38.26 
 
 
244 aa  176  5e-43  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2433  Crp/FNR family transcriptional regulator  40.93 
 
 
247 aa  174  9.999999999999999e-43  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.168738  normal  0.817452 
 
 
-
 
NC_011894  Mnod_1991  transcriptional regulator, Crp/Fnr family  40.09 
 
 
249 aa  171  1e-41  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.250977  n/a   
 
 
-
 
NC_010505  Mrad2831_2950  Crp/FNR family transcriptional regulator  38.89 
 
 
250 aa  167  2.9999999999999998e-40  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.908761  normal 
 
 
-
 
NC_011894  Mnod_3758  transcriptional regulator, Crp/Fnr family  40.91 
 
 
247 aa  160  2e-38  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_6209  Crp/FNR family transcriptional regulator  40.91 
 
 
247 aa  161  2e-38  Methylobacterium sp. 4-46  Bacteria  normal  0.0102902  normal  0.673418 
 
 
-
 
NC_012850  Rleg_2944  transcriptional regulator, Crp/Fnr family  37.33 
 
 
246 aa  160  3e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0738845  normal 
 
 
-
 
NC_011757  Mchl_2990  transcriptional regulator, Crp/Fnr family  41.21 
 
 
244 aa  159  4e-38  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2763  cyclic nucleotide-binding  41.21 
 
 
244 aa  159  5e-38  Methylobacterium extorquens PA1  Bacteria  normal  0.746131  normal 
 
 
-
 
NC_011369  Rleg2_2686  transcriptional regulator, Crp/Fnr family  37.67 
 
 
239 aa  158  8e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.038663  normal 
 
 
-
 
NC_010725  Mpop_2886  transcriptional regulator, Crp/Fnr family  40.1 
 
 
244 aa  158  8e-38  Methylobacterium populi BJ001  Bacteria  normal  0.473656  normal 
 
 
-
 
NC_010505  Mrad2831_1359  Crp/FNR family transcriptional regulator  41.05 
 
 
236 aa  158  9e-38  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.342582  normal  0.0135439 
 
 
-
 
NC_011757  Mchl_0060  transcriptional regulator, Crp/Fnr family  39.57 
 
 
384 aa  156  3e-37  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_2447  cyclic nucleotide-binding protein  41.74 
 
 
255 aa  156  4e-37  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_0953  CRP/FNR family transcriptional regulator  38.17 
 
 
254 aa  154  1e-36  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_3832  transcriptional regulator, Crp/Fnr family  37.93 
 
 
245 aa  154  1e-36  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1439  Crp/FNR family transcriptional regulator  40.28 
 
 
243 aa  153  2.9999999999999998e-36  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.000118444 
 
 
-
 
NC_009485  BBta_4270  CRP/FNR family transcriptional regulator  36.79 
 
 
225 aa  150  3e-35  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0893417 
 
 
-
 
NC_010725  Mpop_0133  transcriptional regulator, Crp/Fnr family  38.71 
 
 
268 aa  148  1.0000000000000001e-34  Methylobacterium populi BJ001  Bacteria  normal  0.564261  normal  0.0379159 
 
 
-
 
NC_011757  Mchl_2301  transcriptional regulator, Crp/Fnr family  39.35 
 
 
259 aa  147  2.0000000000000003e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.161686 
 
 
-
 
NC_011757  Mchl_3385  transcriptional regulator, Crp/Fnr family  36.96 
 
 
384 aa  147  2.0000000000000003e-34  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_2024  cyclic nucleotide-binding  39.35 
 
 
259 aa  147  2.0000000000000003e-34  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.996332 
 
 
-
 
NC_010725  Mpop_3862  transcriptional regulator, Crp/Fnr family  36.22 
 
 
249 aa  147  2.0000000000000003e-34  Methylobacterium populi BJ001  Bacteria  normal  0.582037  normal  0.123136 
 
 
-
 
NC_011894  Mnod_7477  transcriptional regulator, Crp/Fnr family  36.87 
 
 
246 aa  144  1e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.403111  n/a   
 
 
-
 
NC_010511  M446_4564  Crp/FNR family transcriptional regulator  37.69 
 
 
257 aa  144  2e-33  Methylobacterium sp. 4-46  Bacteria  normal  decreased coverage  0.00106309 
 
 
-
 
NC_010505  Mrad2831_1441  Crp/FNR family transcriptional regulator  36.44 
 
 
259 aa  143  3e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  hitchhiker  0.00010652 
 
 
-
 
NC_010172  Mext_0073  cyclic nucleotide-binding  36.91 
 
 
255 aa  143  4e-33  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_4497  transcriptional regulator, Crp/Fnr family  37.06 
 
 
255 aa  142  6e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0140276  n/a   
 
 
-
 
NC_011757  Mchl_5361  transcriptional regulator, Crp/Fnr family  37.44 
 
 
299 aa  142  6e-33  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_6403  Crp/FNR family transcriptional regulator  38.89 
 
 
246 aa  142  7e-33  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_5417  transcriptional regulator, Crp/Fnr family  33.2 
 
 
298 aa  142  7e-33  Methylobacterium populi BJ001  Bacteria  normal  0.36754  normal 
 
 
-
 
NC_010725  Mpop_1986  transcriptional regulator, Crp/Fnr family  37.96 
 
 
259 aa  142  8e-33  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0783  cyclic nucleotide-binding  38.07 
 
 
376 aa  140  1.9999999999999998e-32  Methylobacterium extorquens PA1  Bacteria  normal  0.0359827  normal 
 
 
-
 
NC_010172  Mext_4876  cyclic nucleotide-binding  36.92 
 
 
317 aa  140  1.9999999999999998e-32  Methylobacterium extorquens PA1  Bacteria  normal  0.155933  normal 
 
 
-
 
NC_010172  Mext_0772  cyclic nucleotide-binding  35.81 
 
 
254 aa  139  4.999999999999999e-32  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3480  cyclic nucleotide-binding  35.96 
 
 
249 aa  138  8.999999999999999e-32  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3788  transcriptional regulator, Crp/Fnr family  35.96 
 
 
249 aa  138  1e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.371562 
 
 
-
 
NC_009485  BBta_2391  CRP/FNR family transcriptional regulator  33.03 
 
 
274 aa  137  2e-31  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_7493  transcriptional regulator, Crp/Fnr family  34.85 
 
 
246 aa  137  3.0000000000000003e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2367  putative transcriptional regulator, Crp/Fnr family  36.23 
 
 
255 aa  134  1.9999999999999998e-30  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0615204  n/a   
 
 
-
 
NC_009485  BBta_0859  CRP/FNR family transcriptional regulator  35.96 
 
 
234 aa  134  1.9999999999999998e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0477074 
 
 
-
 
NC_010510  Mrad2831_6249  Crp/FNR family transcriptional regulator  36.32 
 
 
281 aa  132  5e-30  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.999867 
 
 
-
 
NC_011004  Rpal_1184  transcriptional regulator, Crp/Fnr family  32.35 
 
 
243 aa  130  2.0000000000000002e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_4068  Crp/FNR family transcriptional regulator  32.9 
 
 
247 aa  127  2.0000000000000002e-28  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.936766  normal 
 
 
-
 
NC_011894  Mnod_3167  transcriptional regulator, Crp/Fnr family  33.9 
 
 
307 aa  126  4.0000000000000003e-28  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008686  Pden_2108  CRP/FNR family transcriptional regulator  38.92 
 
 
243 aa  126  4.0000000000000003e-28  Paracoccus denitrificans PD1222  Bacteria  normal  0.819689  normal  0.0771917 
 
 
-
 
NC_011893  Mnod_8765  putative transcriptional regulator, Crp/Fnr family  36.68 
 
 
244 aa  125  1e-27  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.474033  n/a   
 
 
-
 
NC_010511  M446_4036  Crp/FNR family transcriptional regulator  36.41 
 
 
315 aa  125  1e-27  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3805  cyclic nucleotide-binding  33.79 
 
 
263 aa  124  2e-27  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_6056  Crp/FNR family transcriptional regulator  32.83 
 
 
241 aa  121  9.999999999999999e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_1835  cyclic nucleotide-binding protein  35.2 
 
 
281 aa  120  1.9999999999999998e-26  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4786  cyclic nucleotide-binding protein  33.19 
 
 
243 aa  120  3e-26  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_6130  putative transcriptional regulator, Crp/Fnr family  36.24 
 
 
244 aa  120  3e-26  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_0955  CRP/FNR family transcriptional regulator  34.09 
 
 
226 aa  119  7.999999999999999e-26  Sphingomonas wittichii RW1  Bacteria  normal  0.869769  normal 
 
 
-
 
NC_011004  Rpal_3741  transcriptional regulator, Crp/Fnr family  33.76 
 
 
242 aa  114  2.0000000000000002e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1427  putative transcriptional regulator, Crp/Fnr family  28.82 
 
 
267 aa  113  5e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_1230  Crp/FNR family transcriptional regulator  33.33 
 
 
263 aa  112  7.000000000000001e-24  Methylobacterium sp. 4-46  Bacteria  normal  0.583862  normal 
 
 
-
 
NC_011988  Avi_5989  transcriptional regulator CRP family  34.69 
 
 
257 aa  108  1e-22  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007494  RSP_3616  Crp/FNR family transcriptional regulator  34.3 
 
 
243 aa  106  4e-22  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1153  transcriptional regulator, Crp/Fnr family  33.17 
 
 
250 aa  106  5e-22  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_1000  transcriptional regulator, Crp/Fnr family  32.67 
 
 
250 aa  103  4e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.523077  normal  0.289991 
 
 
-
 
NC_007947  Mfla_1734  Crp/FNR family transcriptional regulator  31.16 
 
 
241 aa  101  2e-20  Methylobacillus flagellatus KT  Bacteria  normal  0.79675  hitchhiker  0.000773544 
 
 
-
 
NC_009956  Dshi_3844  cyclic nucleotide-binding protein  31.53 
 
 
242 aa  100  2e-20  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_1953  Crp/FNR family transcriptional regulator  31.8 
 
 
246 aa  100  3e-20  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_009429  Rsph17025_3486  putative signal transduction histidine kinase  30.54 
 
 
243 aa  100  4e-20  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.173486 
 
 
-
 
NC_009049  Rsph17029_0604  cyclic nucleotide-binding protein  31.38 
 
 
246 aa  99.4  7e-20  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2400  CRP/FNR family transcriptional regulator  31.02 
 
 
250 aa  97.8  2e-19  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.0375093 
 
 
-
 
NC_008254  Meso_2575  Crp/FNR family transcriptional regulator  33.33 
 
 
240 aa  96.3  5e-19  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0189  Crp/FNR family transcriptional regulator  29.09 
 
 
235 aa  95.1  1e-18  Brucella ovis ATCC 25840  Bacteria  normal  0.338052  n/a   
 
 
-
 
NC_009667  Oant_0266  CRP/FNR family transcriptional regulator  28.64 
 
 
253 aa  92.4  7e-18  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_004310  BR0196  Crp/FNR family transcriptional regulator  28.64 
 
 
253 aa  91.7  1e-17  Brucella suis 1330  Bacteria  normal  0.0367027  n/a   
 
 
-
 
NC_007643  Rru_A1787  cyclic nucleotide-binding domain-containing protein  31.82 
 
 
263 aa  90.5  3e-17  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0414  Crp/FNR family transcriptional regulator  29.74 
 
 
252 aa  88.2  1e-16  Brucella suis 1330  Bacteria  normal  0.766284  n/a   
 
 
-
 
NC_007963  Csal_0983  Crp/FNR family transcriptional regulator  30.37 
 
 
245 aa  88.6  1e-16  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0357  Crp/FNR family transcriptional regulator  29.74 
 
 
252 aa  88.2  1e-16  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_0997  transcriptional regulator, Crp/Fnr family  29.85 
 
 
230 aa  86.7  4e-16  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0532  cyclic nucleotide-binding protein  27.31 
 
 
276 aa  86.3  5e-16  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.053126  normal  0.207643 
 
 
-
 
NC_008254  Meso_3865  Crp/FNR family transcriptional regulator  32.5 
 
 
252 aa  85.1  0.000000000000001  Chelativorans sp. BNC1  Bacteria  normal  0.925805  n/a   
 
 
-
 
NC_008752  Aave_4040  Crp/FNR family transcriptional regulator  29.52 
 
 
256 aa  84.7  0.000000000000002  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.858211 
 
 
-
 
NC_010511  M446_5658  cyclic nucleotide-binding protein  31.25 
 
 
245 aa  83.6  0.000000000000003  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4822  cyclic nucleotide-binding protein  29.59 
 
 
243 aa  83.2  0.000000000000005  Sinorhizobium medicae WSM419  Bacteria  normal  0.379105  normal  0.123433 
 
 
-
 
NC_013889  TK90_1862  transcriptional regulator, Crp/Fnr family  30.43 
 
 
250 aa  82.8  0.000000000000006  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0720375  normal  0.182435 
 
 
-
 
NC_009428  Rsph17025_2705  cyclic nucleotide-binding protein  29.84 
 
 
249 aa  82.8  0.000000000000006  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_3367  CRP/FNR family transcriptional regulator  30.26 
 
 
252 aa  82.8  0.000000000000007  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.184948  n/a   
 
 
-
 
NC_008825  Mpe_A2201  transcriptional regulator  30.26 
 
 
262 aa  80.9  0.00000000000002  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.586423 
 
 
-
 
NC_009049  Rsph17029_2934  cyclic nucleotide-binding protein  30.37 
 
 
249 aa  80.9  0.00000000000002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007493  RSP_1275  Crp/Fnr family transcriptional regulator  30.37 
 
 
249 aa  80.5  0.00000000000003  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_1854  CRP/FNR family transcriptional regulator  27.08 
 
 
250 aa  80.5  0.00000000000003  Marinobacter aquaeolei VT8  Bacteria  normal  0.191124  n/a   
 
 
-
 
NC_009952  Dshi_0447  transcriptional regulator  28.9 
 
 
262 aa  79.3  0.00000000000006  Dinoroseobacter shibae DFL 12  Bacteria  decreased coverage  0.00494896  normal 
 
 
-
 
NC_011894  Mnod_5597  putative transcriptional regulator, Crp/Fnr family  31.32 
 
 
246 aa  78.6  0.0000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0675352  n/a   
 
 
-
 
NC_007794  Saro_0490  CRP/FNR family transcriptional regulator  30.11 
 
 
256 aa  77.4  0.0000000000003  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3499  CRP/FNR family transcriptional regulator  28.86 
 
 
286 aa  76.6  0.0000000000004  Methylobacterium extorquens PA1  Bacteria  normal  0.519814  normal 
 
 
-
 
NC_008309  HS_0878  fumarate/nitrate reduction transcriptional regulator  27.83 
 
 
257 aa  74.3  0.000000000002  Haemophilus somnus 129PT  Bacteria  normal  0.0364978  n/a   
 
 
-
 
NC_007802  Jann_3568  cyclic nucleotide-binding domain-containing protein  26.49 
 
 
242 aa  69.3  0.00000000007  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_0460  CRP/FNR family transcriptional regulator  24.53 
 
 
256 aa  68.2  0.0000000001  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1993  fumarate/nitrate reduction transcriptional regulator  24.53 
 
 
249 aa  67.8  0.0000000002  Shewanella loihica PV-4  Bacteria  normal  0.238952  normal 
 
 
-
 
NC_010159  YpAngola_A2293  fumarate/nitrate reduction transcriptional regulator  23.56 
 
 
250 aa  67.4  0.0000000003  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1944  fumarate/nitrate reduction transcriptional regulator  23.56 
 
 
250 aa  67  0.0000000004  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.755264  n/a   
 
 
-
 
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