More than 300 homologs were found in PanDaTox collection
for query gene Ksed_04030 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013169  Ksed_04030  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
223 aa  418  1e-116  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.253855  normal  0.0592312 
 
 
-
 
NC_013441  Gbro_2881  response regulator receiver  47.95 
 
 
220 aa  174  9.999999999999999e-43  Gordonia bronchialis DSM 43247  Bacteria  decreased coverage  0.00126066  n/a   
 
 
-
 
NC_013595  Sros_1936  response regulator receiver protein  47.91 
 
 
205 aa  170  1e-41  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3380  two component transcriptional regulator, LuxR family  49.55 
 
 
222 aa  170  2e-41  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013235  Namu_4606  two component transcriptional regulator, LuxR family  45.58 
 
 
207 aa  166  2e-40  Nakamurella multipartita DSM 44233  Bacteria  normal  normal  0.296562 
 
 
-
 
NC_013757  Gobs_1030  two component transcriptional regulator, LuxR family  51.8 
 
 
212 aa  166  2.9999999999999998e-40  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_1071  two component LuxR family transcriptional regulator  47.91 
 
 
209 aa  166  2.9999999999999998e-40  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0175  two component transcriptional regulator, LuxR family  46.82 
 
 
222 aa  159  4e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7346  two component transcriptional regulator, LuxR family  48.2 
 
 
211 aa  157  1e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0451998 
 
 
-
 
NC_008541  Arth_4147  two component LuxR family transcriptional regulator  50.47 
 
 
218 aa  157  2e-37  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_3811  two component transcriptional regulator, LuxR family  44.24 
 
 
206 aa  155  5.0000000000000005e-37  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  hitchhiker  0.00252848 
 
 
-
 
NC_012669  Bcav_0717  two component transcriptional regulator, LuxR family  47.44 
 
 
209 aa  154  1e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.854815  normal  0.189113 
 
 
-
 
NC_013235  Namu_3632  two component transcriptional regulator, LuxR family  49.55 
 
 
209 aa  152  5.9999999999999996e-36  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00835522  normal  0.0174868 
 
 
-
 
NC_013595  Sros_0928  response regulator receiver protein  43.58 
 
 
207 aa  151  8.999999999999999e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0707495  normal 
 
 
-
 
NC_013595  Sros_0827  response regulator receiver protein  45.37 
 
 
217 aa  150  1e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_1051  two component transcriptional regulator, LuxR family  43.52 
 
 
211 aa  150  2e-35  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0337978 
 
 
-
 
NC_013172  Bfae_00310  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.12 
 
 
213 aa  149  3e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  47.91 
 
 
212 aa  149  4e-35  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_1981  two component transcriptional regulator, LuxR family  48.17 
 
 
222 aa  149  5e-35  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_18530  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.57 
 
 
209 aa  148  7e-35  Micrococcus luteus NCTC 2665  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2683  two component transcriptional regulator, LuxR family  47.95 
 
 
209 aa  147  1.0000000000000001e-34  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3541  two component transcriptional regulator, LuxR family  46.05 
 
 
211 aa  146  2.0000000000000003e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.485125  normal  0.513005 
 
 
-
 
NC_008148  Rxyl_0160  two component LuxR family transcriptional regulator  42.79 
 
 
212 aa  146  2.0000000000000003e-34  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0277  response regulator receiver protein  45.21 
 
 
214 aa  146  3e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4744  response regulator receiver protein  45.91 
 
 
209 aa  145  4.0000000000000006e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  0.620464  normal  0.690137 
 
 
-
 
NC_013093  Amir_0513  two component transcriptional regulator, LuxR family  46.51 
 
 
209 aa  145  4.0000000000000006e-34  Actinosynnema mirum DSM 43827  Bacteria  normal  0.52986  n/a   
 
 
-
 
NC_013947  Snas_2579  two component transcriptional regulator, LuxR family  44.19 
 
 
213 aa  145  6e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.0500394 
 
 
-
 
NC_014211  Ndas_4922  two component transcriptional regulator, LuxR family  45.62 
 
 
206 aa  145  7.0000000000000006e-34  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0302523  normal 
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  43.72 
 
 
207 aa  142  5e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_013739  Cwoe_0615  two component transcriptional regulator, LuxR family  45.05 
 
 
216 aa  142  6e-33  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_2482  two component transcriptional regulator, LuxR family  45.16 
 
 
208 aa  140  9.999999999999999e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0211915  normal  0.642006 
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  43.38 
 
 
234 aa  137  8.999999999999999e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.683883 
 
 
-
 
NC_007404  Tbd_2464  two component LuxR family transcriptional regulator  39.61 
 
 
221 aa  137  1e-31  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0074  response regulator receiver protein  44.7 
 
 
207 aa  134  8e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0642  two component transcriptional regulator, LuxR family  41.26 
 
 
208 aa  134  1.9999999999999998e-30  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_011138  MADE_03853  transcriptional regulator NarL  34.6 
 
 
217 aa  132  3e-30  Alteromonas macleodii 'Deep ecotype'  Bacteria  unclonable  0.0000020037  n/a   
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  43.72 
 
 
210 aa  132  3e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_008541  Arth_0485  two component LuxR family transcriptional regulator  42.5 
 
 
208 aa  130  1.0000000000000001e-29  Arthrobacter sp. FB24  Bacteria  normal  0.0855535  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  35.55 
 
 
216 aa  130  2.0000000000000002e-29  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  37.26 
 
 
219 aa  130  2.0000000000000002e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  41.86 
 
 
207 aa  129  3e-29  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  40.93 
 
 
207 aa  129  3e-29  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  36.79 
 
 
219 aa  128  6e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.817999 
 
 
-
 
NC_013131  Caci_6980  two component transcriptional regulator, LuxR family  43.52 
 
 
213 aa  128  7.000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.999676 
 
 
-
 
NC_009767  Rcas_4227  two component LuxR family transcriptional regulator  40.93 
 
 
213 aa  127  1.0000000000000001e-28  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.624898 
 
 
-
 
NC_013235  Namu_0487  two component transcriptional regulator, LuxR family  39.91 
 
 
215 aa  127  2.0000000000000002e-28  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  40.17 
 
 
225 aa  127  2.0000000000000002e-28  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  34.72 
 
 
209 aa  126  2.0000000000000002e-28  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008010  Dgeo_2486  two component LuxR family transcriptional regulator  38.5 
 
 
208 aa  125  4.0000000000000003e-28  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  32.71 
 
 
207 aa  125  5e-28  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  32.71 
 
 
207 aa  125  5e-28  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  36.06 
 
 
213 aa  124  9e-28  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1384  LuxR family DNA-binding response regulator  32.71 
 
 
207 aa  124  1e-27  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.000639089  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0919  two component LuxR family transcriptional regulator  32.72 
 
 
214 aa  124  1e-27  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  36.77 
 
 
238 aa  123  2e-27  Frankia sp. CcI3  Bacteria  normal  normal  0.135118 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  37.89 
 
 
227 aa  122  3e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  39.61 
 
 
214 aa  123  3e-27  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4064  two component transcriptional regulator, LuxR family  40.62 
 
 
217 aa  122  3e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_0065  two component transcriptional regulator, LuxR family  38.79 
 
 
204 aa  122  4e-27  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  34.76 
 
 
234 aa  122  4e-27  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.336237 
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  36.52 
 
 
250 aa  122  5e-27  Frankia sp. EAN1pec  Bacteria  normal  normal  0.631776 
 
 
-
 
NC_009972  Haur_3654  two component LuxR family transcriptional regulator  38.65 
 
 
221 aa  122  6e-27  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.0000210563  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  35 
 
 
234 aa  121  9e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0224272 
 
 
-
 
NC_009708  YpsIP31758_1270  nitrate/nitrite response regulator protein NarP  35.47 
 
 
209 aa  121  9e-27  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.214676  n/a   
 
 
-
 
NC_003909  BCE_1102  LuxR family DNA-binding response regulator  32.57 
 
 
214 aa  120  9.999999999999999e-27  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_2342  response regulator receiver  40.45 
 
 
212 aa  120  9.999999999999999e-27  Gordonia bronchialis DSM 43247  Bacteria  normal  0.88989  n/a   
 
 
-
 
NC_007951  Bxe_A1815  two component LuxR family transcriptional regulator  37.9 
 
 
213 aa  120  9.999999999999999e-27  Burkholderia xenovorans LB400  Bacteria  normal  0.922696  normal  0.34679 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  37.28 
 
 
232 aa  121  9.999999999999999e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_008340  Mlg_1006  two component LuxR family transcriptional regulator  39.07 
 
 
219 aa  120  9.999999999999999e-27  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  34.8 
 
 
225 aa  120  9.999999999999999e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_007204  Psyc_0602  nitrate/nitrite response regulator  33.65 
 
 
219 aa  120  1.9999999999999998e-26  Psychrobacter arcticus 273-4  Bacteria  normal  0.790372  normal 
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  37.12 
 
 
239 aa  120  1.9999999999999998e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_009524  PsycPRwf_0663  two component LuxR family transcriptional regulator  34.72 
 
 
219 aa  120  1.9999999999999998e-26  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1619  two component transcriptional regulator, LuxR family  38.39 
 
 
234 aa  119  3e-26  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  39.23 
 
 
212 aa  119  3e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  37.66 
 
 
226 aa  119  3e-26  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal 
 
 
-
 
NC_009832  Spro_3490  two component LuxR family transcriptional regulator  37.75 
 
 
210 aa  119  3e-26  Serratia proteamaculans 568  Bacteria  normal  0.0559776  normal 
 
 
-
 
NC_011831  Cagg_0340  two component transcriptional regulator, LuxR family  37.07 
 
 
217 aa  119  3.9999999999999996e-26  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00614189  hitchhiker  0.00317709 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  37.39 
 
 
221 aa  119  3.9999999999999996e-26  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_010465  YPK_1384  two component LuxR family transcriptional regulator  35.96 
 
 
209 aa  119  3.9999999999999996e-26  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2794  nitrate/nitrite response regulator protein NarP  35.96 
 
 
209 aa  119  3.9999999999999996e-26  Yersinia pestis Angola  Bacteria  normal  normal  0.0858473 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  32.2 
 
 
213 aa  119  3.9999999999999996e-26  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  37.67 
 
 
214 aa  119  4.9999999999999996e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal 
 
 
-
 
NC_011312  VSAL_I2370  nitrate/nitrite response regulator protein NarP  35.29 
 
 
203 aa  118  7e-26  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  35.12 
 
 
226 aa  118  7e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  37.33 
 
 
226 aa  118  7e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_008025  Dgeo_0555  two component LuxR family transcriptional regulator  37.84 
 
 
228 aa  117  9.999999999999999e-26  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_4275  two component LuxR family transcriptional regulator  36.36 
 
 
226 aa  117  9.999999999999999e-26  Roseiflexus sp. RS-1  Bacteria  normal  0.798613  normal  0.287125 
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  38.14 
 
 
206 aa  117  1.9999999999999998e-25  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  34.78 
 
 
253 aa  117  1.9999999999999998e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_2789  two component transcriptional regulator, LuxR family  33.48 
 
 
212 aa  117  1.9999999999999998e-25  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.246733  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  37.07 
 
 
224 aa  117  1.9999999999999998e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  34.11 
 
 
221 aa  116  3e-25  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.0179337 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  32.74 
 
 
226 aa  116  3e-25  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009953  Sare_1528  two component LuxR family transcriptional regulator  35.41 
 
 
212 aa  116  3e-25  Salinispora arenicola CNS-205  Bacteria  normal  0.212037  hitchhiker  0.000165031 
 
 
-
 
NC_009380  Strop_1577  response regulator receiver  35.41 
 
 
212 aa  116  3e-25  Salinispora tropica CNB-440  Bacteria  normal  normal  0.967001 
 
 
-
 
NC_009831  Ssed_1951  putative nitrate/nitrite response regulator; NarL  34.55 
 
 
213 aa  116  3e-25  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0120802  normal  0.965323 
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  39.32 
 
 
235 aa  115  3.9999999999999997e-25  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_012669  Bcav_2822  two component transcriptional regulator, LuxR family  35.68 
 
 
231 aa  115  5e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_008782  Ajs_0433  two component LuxR family transcriptional regulator  36.7 
 
 
223 aa  115  6e-25  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>