More than 300 homologs were found in PanDaTox collection
for query gene Avi_7592 on replicon NC_011981
Organism: Agrobacterium vitis S4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011981  Avi_7592  ABC transporter  100 
 
 
306 aa  606  9.999999999999999e-173  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_0639  binding-protein-dependent transport systems inner membrane component  44.96 
 
 
305 aa  241  1e-62  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.371496  n/a   
 
 
-
 
NC_007778  RPB_0176  binding-protein dependent transport system inner membrane protein  43.05 
 
 
314 aa  234  1.0000000000000001e-60  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  40.6 
 
 
310 aa  231  1e-59  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA1182  sugar ABC transporter, permease protein, putative  41.7 
 
 
319 aa  227  2e-58  Brucella suis 1330  Bacteria  normal  0.547049  n/a   
 
 
-
 
NC_007958  RPD_3149  binding-protein-dependent transport systems inner membrane component  43.48 
 
 
315 aa  227  2e-58  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0566553  normal  0.330059 
 
 
-
 
NC_009504  BOV_A1085  putative sugar ABC transporter, permease protein  41.88 
 
 
319 aa  225  8e-58  Brucella ovis ATCC 25840  Bacteria  normal  0.589946  n/a   
 
 
-
 
NC_009429  Rsph17025_3551  binding-protein-dependent transport systems inner membrane component  42.29 
 
 
301 aa  221  1.9999999999999999e-56  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.963791  normal 
 
 
-
 
NC_011988  Avi_5329  ABC transporter membrane spanning protein  43.98 
 
 
308 aa  219  6e-56  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_0131  binding-protein-dependent transport systems inner membrane component  39.54 
 
 
319 aa  212  5.999999999999999e-54  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.128042  n/a   
 
 
-
 
NC_011369  Rleg2_1771  binding-protein-dependent transport systems inner membrane component  40.52 
 
 
307 aa  188  1e-46  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.2153  normal  0.0141948 
 
 
-
 
NC_012669  Bcav_2847  binding-protein-dependent transport systems inner membrane component  36.12 
 
 
305 aa  176  4e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.661532 
 
 
-
 
NC_012669  Bcav_1523  binding-protein-dependent transport systems inner membrane component  38.19 
 
 
321 aa  175  9.999999999999999e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  36.04 
 
 
320 aa  167  2e-40  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1549  MalF-type ABC sugar transport systems permease component  35.66 
 
 
317 aa  162  6e-39  Bifidobacterium longum DJO10A  Bacteria  normal  0.649517  n/a   
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  31.29 
 
 
320 aa  162  7e-39  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  32.73 
 
 
299 aa  161  1e-38  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
312 aa  158  1e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  33.61 
 
 
296 aa  157  2e-37  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
317 aa  156  4e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  35.64 
 
 
305 aa  156  4e-37  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_011899  Hore_15550  binding-protein-dependent transport systems inner membrane component  35.08 
 
 
294 aa  155  6e-37  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_1151  binding-protein-dependent transport systems inner membrane component  36.03 
 
 
314 aa  153  2.9999999999999998e-36  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.59424  n/a   
 
 
-
 
NC_008781  Pnap_0229  binding-protein-dependent transport systems inner membrane component  33.11 
 
 
312 aa  152  5e-36  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.772545  normal  0.492978 
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  35.92 
 
 
287 aa  151  1e-35  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  34.16 
 
 
309 aa  150  2e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  35.14 
 
 
307 aa  149  4e-35  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  35.14 
 
 
307 aa  149  4e-35  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
318 aa  150  4e-35  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_010002  Daci_5305  binding-protein-dependent transport systems inner membrane component  34.02 
 
 
298 aa  150  4e-35  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.688973 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
318 aa  149  6e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  31.9 
 
 
306 aa  149  6e-35  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
311 aa  148  1.0000000000000001e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_013721  HMPREF0424_1315  ABC transporter, permease protein  35.76 
 
 
301 aa  147  2.0000000000000003e-34  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
319 aa  147  3e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_0461  binding-protein dependent transport system inner membrane protein  34.36 
 
 
301 aa  146  5e-34  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.0667876 
 
 
-
 
NC_012848  Rleg_4872  binding-protein-dependent transport systems inner membrane component  29.74 
 
 
310 aa  145  6e-34  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.181942  normal  0.51159 
 
 
-
 
NC_012669  Bcav_2978  binding-protein-dependent transport systems inner membrane component  36.64 
 
 
289 aa  145  9e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1022  binding-protein-dependent transport systems inner membrane component  32.86 
 
 
294 aa  145  1e-33  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  29.55 
 
 
315 aa  145  1e-33  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  32.97 
 
 
292 aa  145  1e-33  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_013526  Tter_2615  binding-protein-dependent transport systems inner membrane component  34.33 
 
 
307 aa  144  2e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000296099  n/a   
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  32.26 
 
 
306 aa  144  2e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  32.75 
 
 
294 aa  144  2e-33  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_010577  XfasM23_1549  binding-protein-dependent transport systems inner membrane component  30.53 
 
 
293 aa  144  2e-33  Xylella fastidiosa M23  Bacteria  normal  0.563461  n/a   
 
 
-
 
NC_008699  Noca_0042  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
331 aa  143  4e-33  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_3305  binding-protein-dependent transport systems inner membrane component  32.92 
 
 
300 aa  142  6e-33  Acidovorax sp. JS42  Bacteria  normal  0.980927  normal 
 
 
-
 
NC_011992  Dtpsy_2658  binding-protein-dependent transport systems inner membrane component  32.51 
 
 
300 aa  142  7e-33  Acidovorax ebreus TPSY  Bacteria  decreased coverage  0.00312349  n/a   
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  31.79 
 
 
309 aa  142  7e-33  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014165  Tbis_3250  binding-protein-dependent transporter inner membrane component  33.96 
 
 
310 aa  142  7e-33  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03080  permease component of ABC-type sugar transporter  34.05 
 
 
322 aa  142  9.999999999999999e-33  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.151535  normal 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  29.72 
 
 
288 aa  140  1.9999999999999998e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  33.92 
 
 
316 aa  140  1.9999999999999998e-32  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  33.94 
 
 
275 aa  140  1.9999999999999998e-32  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  30.39 
 
 
308 aa  140  1.9999999999999998e-32  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4735  putative glycerol-3-phosphate ABC transporter, permease protein  28.53 
 
 
310 aa  140  3e-32  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_010513  Xfasm12_1606  ABC transporter sugar permease  30.18 
 
 
293 aa  140  3e-32  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  29.87 
 
 
308 aa  139  3.9999999999999997e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  30.53 
 
 
295 aa  139  4.999999999999999e-32  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A0604  putative glycerol-3-phosphate ABC transporter, permease protein  28.21 
 
 
310 aa  139  6e-32  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  30.85 
 
 
307 aa  139  6e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0698  putative glycerol-3-phosphate ABC transporter, permease protein  28.21 
 
 
310 aa  139  6e-32  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_3242  binding-protein-dependent transport systems inner membrane component  33 
 
 
317 aa  139  6e-32  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  31.65 
 
 
305 aa  139  7e-32  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0480  glycerol-3-phosphate ABC transporter, permease  28.21 
 
 
310 aa  139  7.999999999999999e-32  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0623  putative glycerol-3-phosphate ABC transporter, permease protein  28.21 
 
 
310 aa  139  7.999999999999999e-32  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013595  Sros_8235  ABC transporter, permease protein  33.81 
 
 
306 aa  139  8.999999999999999e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_005957  BT9727_0478  glycerol-3-phosphate ABC transporter, permease  28.21 
 
 
310 aa  138  1e-31  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3982  binding-protein-dependent transport systems inner membrane component  34.27 
 
 
316 aa  138  1e-31  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_003909  BCE_0630  glycerol-3-phosphate ABC transporter, permease protein, putative  27.88 
 
 
310 aa  137  2e-31  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_0526  ABC-type sugar transport systems permease components-like  31.52 
 
 
293 aa  137  2e-31  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS0536  glycerol-3-phosphate ABC transporter permease  27.88 
 
 
310 aa  137  3.0000000000000003e-31  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2055  binding-protein-dependent transport systems inner membrane component  29.28 
 
 
415 aa  137  3.0000000000000003e-31  Meiothermus silvanus DSM 9946  Bacteria  normal  0.33288  normal  0.443347 
 
 
-
 
NC_007530  GBAA_0567  glycerol-3-phosphate ABC transporter permease protein  27.88 
 
 
310 aa  137  3.0000000000000003e-31  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29410  carbohydrate ABC transporter membrane protein  31.46 
 
 
322 aa  137  3.0000000000000003e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  0.899558  n/a   
 
 
-
 
NC_009667  Oant_2484  binding-protein-dependent transport systems inner membrane component  33.58 
 
 
318 aa  136  5e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.575298  n/a   
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  35.63 
 
 
283 aa  136  6.0000000000000005e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0481  binding-protein-dependent transport systems inner membrane component  27.56 
 
 
310 aa  135  7.000000000000001e-31  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  29.62 
 
 
313 aa  135  8e-31  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_009718  Fnod_0627  binding-protein-dependent transport systems inner membrane component  29.93 
 
 
294 aa  135  8e-31  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.0000000558297  n/a   
 
 
-
 
NC_014210  Ndas_0753  binding-protein-dependent transport systems inner membrane component  32.95 
 
 
312 aa  135  9e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.308461  normal 
 
 
-
 
NC_012669  Bcav_2817  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
310 aa  134  9.999999999999999e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.822068  normal 
 
 
-
 
NC_011899  Hore_20510  binding-protein-dependent transport systems inner membrane component  29.86 
 
 
290 aa  134  9.999999999999999e-31  Halothermothrix orenii H 168  Bacteria  normal  0.0790749  n/a   
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
285 aa  135  9.999999999999999e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_010717  PXO_00881  ABC transporter sugar permease  31.85 
 
 
294 aa  134  1.9999999999999998e-30  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0244413  n/a   
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  32.14 
 
 
299 aa  134  1.9999999999999998e-30  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
NC_009636  Smed_2314  binding-protein-dependent transport systems inner membrane component  31.07 
 
 
310 aa  134  1.9999999999999998e-30  Sinorhizobium medicae WSM419  Bacteria  normal  0.498676  normal  0.350334 
 
 
-
 
NC_013525  Tter_1290  binding-protein-dependent transport systems inner membrane component  32.36 
 
 
297 aa  133  3e-30  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_0527  binding-protein-dependent transport systems inner membrane component  31.97 
 
 
296 aa  133  3e-30  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000283647  n/a   
 
 
-
 
NC_008262  CPR_0905  transmembrane permease MsmF  29.03 
 
 
289 aa  133  3.9999999999999996e-30  Clostridium perfringens SM101  Bacteria  normal  0.0122469  n/a   
 
 
-
 
NC_011369  Rleg2_3621  binding-protein-dependent transport systems inner membrane component  32 
 
 
305 aa  133  5e-30  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.980812  normal 
 
 
-
 
NC_013739  Cwoe_4882  binding-protein-dependent transport systems inner membrane component  32.96 
 
 
313 aa  133  5e-30  Conexibacter woesei DSM 14684  Bacteria  normal  0.115668  normal 
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  27.93 
 
 
294 aa  132  6e-30  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
316 aa  132  6.999999999999999e-30  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_012850  Rleg_3909  binding-protein-dependent transport systems inner membrane component  32.25 
 
 
305 aa  132  7.999999999999999e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.172275 
 
 
-
 
NC_012669  Bcav_1541  binding-protein-dependent transport systems inner membrane component  32.49 
 
 
327 aa  132  9e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.128939 
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
317 aa  132  1.0000000000000001e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  29.12 
 
 
308 aa  131  1.0000000000000001e-29  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  29.81 
 
 
291 aa  131  1.0000000000000001e-29  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  28.42 
 
 
309 aa  130  2.0000000000000002e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
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