| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5329 |
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| Symbol | |
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| ID | 7380690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 331226 |
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| End bp | 332152 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643648952 |
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| Product | ABC transporter membrane spanning protein |
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| Protein accession | YP_002547189 |
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| Protein GI | 222106398 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCTG GCTCGTCCTC AATGGCGCTT ACGGCTAAGC CTCGTGCAAG CTGGCAAACA
GCCGAGCGCC GGATGGTTCG CCGTGGTCTG TTGTTTGCGG CCCCGGCCGT TTTGCTGTTG
CTGGCGATTT ATATCGTTCC AATGCTTGTG CTGGCCGCCT TTTCTGTCAC GGATTACCAA
CTCGGTGCTC TCACCATTCA CTTTGTCGGG CTCGGCAATT TCATCAAGGC GTTTCACGAT
CCCGTCTTTA TTCGGGCAGT AATCAATACG GCGATCTATG CCGTGATCGT CATTCCTCTC
GGCGTGTTCC TGGCGCTCGG CGTCGCGCTG TTGGTTCACA ATCGCAAGCG CAGCCGGGCC
TTCTGGGAAG TCGCCTATTT CCTTCCGGTC ACCGCTACGC TTGTGGCGAT GGCAACCGTC
TGGCAATTCC TGCTGCACCC CTCACTCGGG CCGGTGAATG CGGCAATCAA ATGGCTGGGA
TTCGAGCCCG TCGCCTTCCT GTCCAATCCG ATGCTGCTCA TTCCAACCAT GGCATGGATT
GGTGTCTGGC AGGTTCTCGG TTTCAACATG GTGCTGTTTC TTGCCGGGCT GACGGCCATT
CCTAAAGATC TACATGAGGC GGTGCGGTTG GATGGCGCCA AAAATTCCAT CGACCGGTTT
TTCACCGTCA CCTGGCCAAT GCTGGGACCA ACGACCCTGT TCGTGGTTGT CACAACATCG
ATCTCGGCTT TCAAGGTTTT CGAGACGGTG GCGGTACTGA CCAAGGGCCG GTCCGGCTCG
GAAACCTTGT TGTTCGATCT CTATCTCGAA GGGTTCGAGT ATTCGAATAC TGGCTACGCC
GCAGCTTTGA CACTGCTCTT TCTGGCCATC GTCCTGATCC TGTCGATTGG CCAGACTCTG
CATATGGACC GGAAGGTACA TTATTGA
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| Protein sequence | MTAGSSSMAL TAKPRASWQT AERRMVRRGL LFAAPAVLLL LAIYIVPMLV LAAFSVTDYQ
LGALTIHFVG LGNFIKAFHD PVFIRAVINT AIYAVIVIPL GVFLALGVAL LVHNRKRSRA
FWEVAYFLPV TATLVAMATV WQFLLHPSLG PVNAAIKWLG FEPVAFLSNP MLLIPTMAWI
GVWQVLGFNM VLFLAGLTAI PKDLHEAVRL DGAKNSIDRF FTVTWPMLGP TTLFVVVTTS
ISAFKVFETV AVLTKGRSGS ETLLFDLYLE GFEYSNTGYA AALTLLFLAI VLILSIGQTL
HMDRKVHY
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