More than 300 homologs were found in PanDaTox collection
for query gene Smon_1384 on replicon NC_013515
Organism: Streptobacillus moniliformis DSM 12112



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013515  Smon_1384  two component transcriptional regulator, LuxR family  100 
 
 
200 aa  389  1e-107  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_013164  Apre_1849  two component transcriptional regulator, LuxR family  40.8 
 
 
197 aa  117  9e-26  Anaerococcus prevotii DSM 20548  Bacteria  normal  0.0165336  n/a   
 
 
-
 
NC_006274  BCZK2895  response regulator of salavaricin regulon  40 
 
 
192 aa  115  6e-25  Bacillus cereus E33L  Bacteria  normal  0.0430888  n/a   
 
 
-
 
NC_013171  Apre_1519  two component transcriptional regulator, LuxR family  40.39 
 
 
198 aa  112  3e-24  Anaerococcus prevotii DSM 20548  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_2959  salavaricin two-component response regulator  38.97 
 
 
192 aa  111  8.000000000000001e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.0000000681739  n/a   
 
 
-
 
NC_013164  Apre_1852  two component transcriptional regulator, LuxR family  41.5 
 
 
201 aa  110  2.0000000000000002e-23  Anaerococcus prevotii DSM 20548  Bacteria  decreased coverage  0.000213283  n/a   
 
 
-
 
NC_012669  Bcav_1588  two component transcriptional regulator, LuxR family  27.09 
 
 
201 aa  104  9e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.117504  normal 
 
 
-
 
NC_013521  Sked_03860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  27.59 
 
 
204 aa  100  2e-20  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0649288  normal  0.281143 
 
 
-
 
NC_014158  Tpau_3534  two component transcriptional regulator, LuxR family  30.97 
 
 
206 aa  98.6  6e-20  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_0528  two component LuxR family transcriptional regulator  27.94 
 
 
201 aa  97.1  2e-19  Frankia sp. EAN1pec  Bacteria  normal  0.653057  normal 
 
 
-
 
NC_013757  Gobs_4836  two component transcriptional regulator, LuxR family  30.77 
 
 
201 aa  96.3  2e-19  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.16538  n/a   
 
 
-
 
NC_014165  Tbis_0907  LuxR family two component transcriptional regulator  30.05 
 
 
197 aa  95.1  7e-19  Thermobispora bispora DSM 43833  Bacteria  normal  0.365102  normal 
 
 
-
 
NC_007333  Tfu_0288  LuxR response regulator receiver  28.08 
 
 
201 aa  92.4  4e-18  Thermobifida fusca YX  Bacteria  normal  0.0935286  n/a   
 
 
-
 
NC_013595  Sros_1680  response regulator receiver protein  29.61 
 
 
197 aa  91.7  6e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.516841 
 
 
-
 
NC_013510  Tcur_2957  two component transcriptional regulator, LuxR family  29.56 
 
 
201 aa  91.7  8e-18  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00144362  n/a   
 
 
-
 
NC_013131  Caci_1897  two component transcriptional regulator, LuxR family  26.73 
 
 
200 aa  89.7  2e-17  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.299419  normal 
 
 
-
 
NC_010117  COXBURSA331_A1168  LuxR family transcriptional regulator  30.1 
 
 
216 aa  89.4  3e-17  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_009727  CBUD_0828  response regulator  30.1 
 
 
216 aa  89.4  3e-17  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  0.0183204  n/a   
 
 
-
 
NC_013205  Aaci_0655  two component transcriptional regulator, LuxR family  26.73 
 
 
200 aa  89  4e-17  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5941  two component LuxR family transcriptional regulator  27.88 
 
 
206 aa  88.6  5e-17  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234506  normal 
 
 
-
 
NC_010117  COXBURSA331_A0896  LuxR family transcriptional regulator  30 
 
 
214 aa  87.8  9e-17  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5474  two component LuxR family transcriptional regulator  26.57 
 
 
212 aa  87  1e-16  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.344108  normal  0.73382 
 
 
-
 
NC_009253  Dred_2108  two component LuxR family transcriptional regulator  32.08 
 
 
218 aa  87  1e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5200  two component transcriptional regulator, LuxR family  26.6 
 
 
223 aa  85.9  3e-16  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0156716  normal  0.415255 
 
 
-
 
NC_009727  CBUD_0998  response regulator  30 
 
 
214 aa  85.9  3e-16  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0765  two component transcriptional regulator, LuxR family  29.3 
 
 
222 aa  85.5  5e-16  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_11510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  27.8 
 
 
203 aa  84.7  7e-16  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.575058  normal 
 
 
-
 
NC_013510  Tcur_1624  two component transcriptional regulator, LuxR family  26.11 
 
 
201 aa  84.7  9e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0305603  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  25.7 
 
 
227 aa  83.2  0.000000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_008025  Dgeo_1626  two component LuxR family transcriptional regulator  27.5 
 
 
194 aa  83.2  0.000000000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.947018 
 
 
-
 
NC_009338  Mflv_5014  two component LuxR family transcriptional regulator  28.57 
 
 
209 aa  83.6  0.000000000000002  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.103708  normal  0.29037 
 
 
-
 
NC_013525  Tter_0799  two component transcriptional regulator, LuxR family  27.31 
 
 
226 aa  82.8  0.000000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013730  Slin_4823  two component transcriptional regulator, LuxR family  29.77 
 
 
214 aa  82.4  0.000000000000004  Spirosoma linguale DSM 74  Bacteria  normal  0.103693  normal  0.11387 
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  29.69 
 
 
236 aa  82.4  0.000000000000005  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_008025  Dgeo_0183  two component LuxR family transcriptional regulator  27.23 
 
 
200 aa  82  0.000000000000006  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.541303  normal  0.654013 
 
 
-
 
NC_013739  Cwoe_5628  two component transcriptional regulator, LuxR family  28.85 
 
 
200 aa  81.6  0.000000000000007  Conexibacter woesei DSM 14684  Bacteria  normal  0.946433  normal  0.876589 
 
 
-
 
NC_014210  Ndas_1808  two component transcriptional regulator, LuxR family  27.23 
 
 
201 aa  81.3  0.00000000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.207018 
 
 
-
 
NC_009972  Haur_1600  two component LuxR family transcriptional regulator  26.57 
 
 
207 aa  80.5  0.00000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013441  Gbro_1936  regulatory protein LuxR  26.92 
 
 
218 aa  80.1  0.00000000000002  Gordonia bronchialis DSM 43247  Bacteria  normal  0.548655  n/a   
 
 
-
 
NC_011312  VSAL_I2141  response regulator  25.48 
 
 
214 aa  80.1  0.00000000000002  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.126922  n/a   
 
 
-
 
NC_012793  GWCH70_0187  two component transcriptional regulator, LuxR family  31 
 
 
199 aa  80.1  0.00000000000002  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6235  two component transcriptional regulator, LuxR family  23.79 
 
 
210 aa  80.1  0.00000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.612124 
 
 
-
 
NC_011083  SeHA_C4121  DNA-binding transcriptional activator UhpA  26.8 
 
 
196 aa  79.7  0.00000000000003  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.97066  normal 
 
 
-
 
NC_011666  Msil_3144  two component transcriptional regulator, LuxR family  26.92 
 
 
232 aa  79  0.00000000000004  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_011149  SeAg_B4016  DNA-binding transcriptional activator UhpA  26.8 
 
 
196 aa  79  0.00000000000004  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  26.67 
 
 
222 aa  79  0.00000000000004  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_011094  SeSA_A4000  DNA-binding transcriptional activator UhpA  26.8 
 
 
196 aa  79  0.00000000000004  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.348805  normal 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  26.67 
 
 
216 aa  79  0.00000000000004  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A4179  DNA-binding transcriptional activator UhpA  26.8 
 
 
196 aa  79  0.00000000000004  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_011080  SNSL254_A4071  DNA-binding transcriptional activator UhpA  26.8 
 
 
196 aa  79  0.00000000000004  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  33.5 
 
 
208 aa  79.3  0.00000000000004  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B4419  competence protein A  31.84 
 
 
218 aa  79  0.00000000000005  Bacillus cereus G9842  Bacteria  normal  0.610555  normal  0.653302 
 
 
-
 
NC_010506  Swoo_4591  two component LuxR family transcriptional regulator  28.36 
 
 
198 aa  78.6  0.00000000000005  Shewanella woodyi ATCC 51908  Bacteria  normal  unclonable  0.00000001788 
 
 
-
 
CP001509  ECD_03553  DNA-binding response regulator in two-component regulatory system wtih UhpB  27.89 
 
 
196 aa  78.6  0.00000000000006  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_0034  two component transcriptional regulator, LuxR family  27.89 
 
 
196 aa  78.6  0.00000000000006  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_010498  EcSMS35_4034  DNA-binding transcriptional activator UhpA  27.89 
 
 
196 aa  78.6  0.00000000000006  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.383338 
 
 
-
 
NC_013947  Snas_0503  two component transcriptional regulator, LuxR family  28.85 
 
 
202 aa  78.6  0.00000000000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.900292 
 
 
-
 
NC_009801  EcE24377A_4178  DNA-binding transcriptional activator UhpA  27.89 
 
 
196 aa  78.6  0.00000000000006  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0876  two component LuxR family transcriptional regulator  27.98 
 
 
233 aa  78.6  0.00000000000006  Ruegeria sp. TM1040  Bacteria  normal  0.481499  normal  0.345787 
 
 
-
 
NC_010658  SbBS512_E4250  DNA-binding transcriptional activator UhpA  27.89 
 
 
196 aa  78.6  0.00000000000006  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A3882  DNA-binding transcriptional activator UhpA  27.89 
 
 
196 aa  78.6  0.00000000000006  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_0030  DNA-binding transcriptional activator UhpA  27.89 
 
 
196 aa  78.6  0.00000000000006  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_03495  hypothetical protein  27.89 
 
 
196 aa  78.6  0.00000000000006  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_5099  DNA-binding transcriptional activator UhpA  27.89 
 
 
196 aa  78.6  0.00000000000006  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.0828785 
 
 
-
 
NC_010184  BcerKBAB4_2996  two component LuxR family transcriptional regulator  26.73 
 
 
595 aa  78.2  0.00000000000007  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.896317  n/a   
 
 
-
 
NC_008347  Mmar10_2744  two component LuxR family transcriptional regulator  27.45 
 
 
201 aa  78.2  0.00000000000007  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_3271  response regulator  23.7 
 
 
214 aa  78.2  0.00000000000008  Colwellia psychrerythraea 34H  Bacteria  normal  0.0222898  n/a   
 
 
-
 
NC_013093  Amir_1937  two component transcriptional regulator, LuxR family  25.12 
 
 
201 aa  78.2  0.00000000000008  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_0409  two component LuxR family transcriptional regulator  30.28 
 
 
232 aa  77.8  0.00000000000009  Dehalococcoides sp. BAV1  Bacteria  normal  0.135269  n/a   
 
 
-
 
NC_011773  BCAH820_1839  DNA-binding response regulator, LuxR family  30.92 
 
 
212 aa  77.8  0.0000000000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_002936  DET0432  LuxR family DNA-binding response regulator  30.28 
 
 
232 aa  77.8  0.0000000000001  Dehalococcoides ethenogenes 195  Bacteria  hitchhiker  0.00543066  n/a   
 
 
-
 
NC_011725  BCB4264_A3228  Two-component protein Kinase  27.4 
 
 
595 aa  77.4  0.0000000000001  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B5477  DNA-binding response regulator  28.92 
 
 
200 aa  77.4  0.0000000000001  Bacillus cereus G9842  Bacteria  hitchhiker  0.00156963  hitchhiker  0.00000000000102018 
 
 
-
 
NC_005945  BAS1659  LuxR family DNA-binding response regulator  30.92 
 
 
212 aa  77.8  0.0000000000001  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5034  DNA-binding response regulator  28.08 
 
 
200 aa  77.4  0.0000000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.617082  n/a   
 
 
-
 
NC_011071  Smal_0258  two component transcriptional regulator, LuxR family  27.88 
 
 
200 aa  77.8  0.0000000000001  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_1791  LuxR family DNA-binding response regulator  30.92 
 
 
212 aa  77.8  0.0000000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.276817  n/a   
 
 
-
 
NC_013552  DhcVS_374  DNA-binding response regulator, LuxR family  29.82 
 
 
232 aa  77.8  0.0000000000001  Dehalococcoides sp. VS  Bacteria  hitchhiker  0.0000120759  n/a   
 
 
-
 
NC_011773  BCAH820_5444  DNA-binding response regulator  28.08 
 
 
200 aa  77.4  0.0000000000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_003909  BCE_1863  LuxR family DNA-binding response regulator  30.43 
 
 
218 aa  76.6  0.0000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  0.345514  n/a   
 
 
-
 
NC_003909  BCE_3291  response regulator receiver domain-containing protein  26.27 
 
 
592 aa  77  0.0000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_5482  DNA-binding response regulator  28.92 
 
 
200 aa  77  0.0000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5200  DNA-binding response regulator  28.43 
 
 
200 aa  76.6  0.0000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK5050  DNA-binding response regulator  27.59 
 
 
200 aa  77  0.0000000000002  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_2356  response regulator  24.41 
 
 
218 aa  76.6  0.0000000000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.996954  n/a   
 
 
-
 
NC_007530  GBAA_5597  DNA-binding response regulator  28.43 
 
 
200 aa  76.6  0.0000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5150  two component LuxR family transcriptional regulator  27.94 
 
 
200 aa  76.6  0.0000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5531  DNA-binding response regulator  28.43 
 
 
200 aa  76.6  0.0000000000002  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1913  DNA-binding response regulator, LuxR family  30.43 
 
 
212 aa  76.6  0.0000000000002  Bacillus cereus AH187  Bacteria  normal  0.605645  n/a   
 
 
-
 
NC_010159  YpAngola_A2052  response regulator  24.41 
 
 
218 aa  76.6  0.0000000000002  Yersinia pestis Angola  Bacteria  hitchhiker  0.0000052182  hitchhiker  0.00148564 
 
 
-
 
NC_011094  SeSA_A2103  response regulator  24.74 
 
 
218 aa  76.6  0.0000000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.0532421  hitchhiker  0.00988724 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  29.2 
 
 
225 aa  77  0.0000000000002  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_011725  BCB4264_A5475  DNA-binding response regulator  28.43 
 
 
200 aa  76.6  0.0000000000002  Bacillus cereus B4264  Bacteria  normal  0.132453  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  27.56 
 
 
224 aa  76.6  0.0000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011149  SeAg_B1173  response regulator  24.74 
 
 
218 aa  76.6  0.0000000000002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  hitchhiker  0.0000706228  n/a   
 
 
-
 
NC_011205  SeD_A1296  response regulator  24.74 
 
 
218 aa  76.6  0.0000000000002  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.0547167  hitchhiker  0.00000564902 
 
 
-
 
NC_009457  VC0395_A0833  response regulator  24.76 
 
 
227 aa  77  0.0000000000002  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000189156  n/a   
 
 
-
 
NC_014158  Tpau_2414  two component transcriptional regulator, LuxR family  23.11 
 
 
215 aa  76.6  0.0000000000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2253  response regulator  24.41 
 
 
218 aa  76.6  0.0000000000002  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.00000726498  n/a   
 
 
-
 
NC_011083  SeHA_C2162  response regulator  24.74 
 
 
218 aa  76.6  0.0000000000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.284818  hitchhiker  0.000000016111 
 
 
-
 
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