Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1852 |
Symbol | |
ID | 8368759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013164 |
Strand | + |
Start bp | 114859 |
End bp | 115464 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 26% |
IMG OID | 644984775 |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003142426 |
Protein GI | 256821227 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000213283 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAATTT TGTTAATAGA AGATCATAAA ATGGTAGCTA CTTCTCTAAA AATGAGCTTG GAAAAAGAAA ATTCGATTAC TGTGGATATA ATAAATAATG TTAGTGAACT TGATATAGAT AGTATAATTT CAAGTTATGA ATTATTACTT ATAGATATTA ATTTAACAGG TATTGAAGGA ACAGTAAATG GTTTGGACTT AGCTGAAAAA TTAATAGAAA AATATAGAGA TATTAAAATT GTTATTTTAA CAGCATATAA ATTAGATTTT TATATAAAAA GGGCAAAGAA AATAGGGTGT AGAGGTTTTA TTTCCAAAGA AGAAGAAACA AATAAACTAA TCCAGAATAT AAAAAATATT GTAGAAAAGG ATAAGATAAT ATTTCCAGAA GAAAACCGTA TGTTAGAGCC GTTGACAAAA TGTGAATTAA AAATAGTGAG ATTATATTCG GAAGGTATGT CTAGGAAAGA GTTAGCTAAA GAACTAAATA CAAATGTAAG AAGTTTAGCA GTATCTTTAT CAAGAATATA TCAAAAGTTA GGTGTTAGAA ATTACCAAGA AATGATAGAT AAAGTGCGTG AATTAGGATA TGTTGATTCA TTTTAG
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Protein sequence | MRILLIEDHK MVATSLKMSL EKENSITVDI INNVSELDID SIISSYELLL IDINLTGIEG TVNGLDLAEK LIEKYRDIKI VILTAYKLDF YIKRAKKIGC RGFISKEEET NKLIQNIKNI VEKDKIIFPE ENRMLEPLTK CELKIVRLYS EGMSRKELAK ELNTNVRSLA VSLSRIYQKL GVRNYQEMID KVRELGYVDS F
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