More than 300 homologs were found in PanDaTox collection
for query gene Sfum_3945 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_3945  binding-protein-dependent transport systems inner membrane component  100 
 
 
200 aa  404  1.0000000000000001e-112  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.711795  normal  0.191402 
 
 
-
 
NC_014150  Bmur_2553  binding-protein-dependent transport systems inner membrane component  51.14 
 
 
275 aa  189  2.9999999999999997e-47  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_5146  binding-protein-dependent transport systems inner membrane component  39.69 
 
 
277 aa  141  7e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0887356  n/a   
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  38.51 
 
 
277 aa  135  5e-31  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_010511  M446_4508  binding-protein-dependent transport systems inner membrane component  37.11 
 
 
277 aa  132  3.9999999999999996e-30  Methylobacterium sp. 4-46  Bacteria  normal  0.854714  normal  0.909107 
 
 
-
 
NC_007644  Moth_1982  binding-protein dependent transport system inner membrane protein  36.06 
 
 
266 aa  132  5e-30  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.187248  normal 
 
 
-
 
NC_013517  Sterm_0483  binding-protein-dependent transport systems inner membrane component  34.22 
 
 
275 aa  130  1.0000000000000001e-29  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  35.9 
 
 
273 aa  126  2.0000000000000002e-28  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  35.9 
 
 
273 aa  126  2.0000000000000002e-28  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  36.92 
 
 
273 aa  127  2.0000000000000002e-28  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_008554  Sfum_2216  binding-protein-dependent transport systems inner membrane component  34.16 
 
 
314 aa  124  9e-28  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.82677  normal  0.484673 
 
 
-
 
NC_009012  Cthe_2803  binding-protein-dependent transport systems inner membrane component  35.79 
 
 
259 aa  124  1e-27  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00122675  n/a   
 
 
-
 
NC_009634  Mevan_0512  binding-protein-dependent transport systems inner membrane component  35.6 
 
 
253 aa  123  2e-27  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_009485  BBta_3299  putative sulfonate ABC transporter, permease protein  35.03 
 
 
286 aa  122  3e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.201269  normal  0.262094 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  33.01 
 
 
273 aa  122  4e-27  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_011988  Avi_5896  nitrate ABC transporter permease protein  32.87 
 
 
297 aa  120  1.9999999999999998e-26  Agrobacterium vitis S4  Bacteria  normal  0.149001  n/a   
 
 
-
 
NC_009135  MmarC5_0393  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
253 aa  119  3e-26  Methanococcus maripaludis C5  Archaea  normal  0.0876322  n/a   
 
 
-
 
NC_012912  Dd1591_1673  binding-protein-dependent transport systems inner membrane component  33.52 
 
 
263 aa  119  3e-26  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1642  binding-protein-dependent transport systems inner membrane component  34.1 
 
 
263 aa  119  3e-26  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  41.3 
 
 
274 aa  119  3.9999999999999996e-26  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_009637  MmarC7_0444  binding-protein-dependent transport systems inner membrane component  34.97 
 
 
253 aa  118  7e-26  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_009674  Bcer98_1998  binding-protein-dependent transport systems inner membrane component  32.51 
 
 
283 aa  117  9.999999999999999e-26  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.894639  n/a   
 
 
-
 
NC_009975  MmarC6_1476  binding-protein-dependent transport systems inner membrane component  34.43 
 
 
253 aa  116  1.9999999999999998e-25  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009832  Spro_1736  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
264 aa  116  3e-25  Serratia proteamaculans 568  Bacteria  normal  0.440066  normal  0.144233 
 
 
-
 
NC_010524  Lcho_3842  nitrate ABC transporter, inner membrane subunit  31.96 
 
 
331 aa  116  3e-25  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008825  Mpe_A0924  ABC transporter permease protein  35.62 
 
 
258 aa  115  3e-25  Methylibium petroleiphilum PM1  Bacteria  normal  0.175022  normal 
 
 
-
 
NC_013530  Xcel_0423  binding-protein-dependent transport systems inner membrane component  36.63 
 
 
297 aa  115  5e-25  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.283538  n/a   
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  33.49 
 
 
283 aa  115  5e-25  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1453  alkanesulfonate transporter permease subunit  33.33 
 
 
263 aa  115  5e-25  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1957  binding-protein-dependent transport systems inner membrane component  34.12 
 
 
273 aa  114  6e-25  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1848  ABC transporter permease  34.12 
 
 
273 aa  114  6e-25  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  39.37 
 
 
273 aa  114  8.999999999999998e-25  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_012917  PC1_0024  binding-protein-dependent transport systems inner membrane component  31.63 
 
 
264 aa  114  1.0000000000000001e-24  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_4075  binding-protein-dependent transport systems inner membrane component  34.59 
 
 
285 aa  114  1.0000000000000001e-24  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.269465 
 
 
-
 
NC_007953  Bxe_C0981  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  34.08 
 
 
279 aa  114  1.0000000000000001e-24  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1734  binding-protein-dependent transport systems inner membrane component  31.91 
 
 
252 aa  114  1.0000000000000001e-24  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_1210  binding-protein-dependent transport systems inner membrane component  35.03 
 
 
315 aa  114  1.0000000000000001e-24  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_0766  binding-protein-dependent transport systems inner membrane component  37.22 
 
 
260 aa  114  1.0000000000000001e-24  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_3464  binding-protein-dependent transport systems inner membrane component  33.9 
 
 
294 aa  114  1.0000000000000001e-24  Xanthobacter autotrophicus Py2  Bacteria  normal  0.136656  normal 
 
 
-
 
NC_010725  Mpop_5011  nitrate ABC transporter, inner membrane subunit  32.14 
 
 
286 aa  113  2.0000000000000002e-24  Methylobacterium populi BJ001  Bacteria  normal  0.312092  normal  0.320206 
 
 
-
 
NC_009485  BBta_2819  nitrate transport permease protein (nrtB)  31.9 
 
 
304 aa  112  2.0000000000000002e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.233469  normal 
 
 
-
 
NC_008639  Cpha266_0145  binding-protein-dependent transport systems inner membrane component  33.17 
 
 
266 aa  113  2.0000000000000002e-24  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5602  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
263 aa  112  3e-24  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0397  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
285 aa  112  4.0000000000000004e-24  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.987071 
 
 
-
 
NC_013421  Pecwa_0030  binding-protein-dependent transport systems inner membrane component  31.12 
 
 
264 aa  112  5e-24  Pectobacterium wasabiae WPP163  Bacteria  normal  0.050552  n/a   
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  41.35 
 
 
271 aa  112  5e-24  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_014150  Bmur_0154  binding-protein-dependent transport systems inner membrane component  29.41 
 
 
264 aa  112  5e-24  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1542  nitrate ABC transporter, inner membrane subunit  30.46 
 
 
304 aa  111  7.000000000000001e-24  Pectobacterium wasabiae WPP163  Bacteria  normal  0.244375  n/a   
 
 
-
 
NC_011004  Rpal_2953  binding-protein-dependent transport systems inner membrane component  32.52 
 
 
294 aa  111  8.000000000000001e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  38.06 
 
 
269 aa  111  8.000000000000001e-24  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_009483  Gura_3884  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
258 aa  111  9e-24  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4495  nitrate ABC transporter, inner membrane subunit  31.63 
 
 
285 aa  111  9e-24  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_0239  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
265 aa  110  1.0000000000000001e-23  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.00756787 
 
 
-
 
NC_013161  Cyan8802_4458  nitrate ABC transporter, inner membrane subunit  29.95 
 
 
277 aa  110  1.0000000000000001e-23  Cyanothece sp. PCC 8802  Bacteria  normal  0.698055  normal  0.534513 
 
 
-
 
NC_007492  Pfl01_5412  binding-protein dependent transport system inner membrane protein  34.48 
 
 
260 aa  110  1.0000000000000001e-23  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.210037  hitchhiker  0.00191971 
 
 
-
 
NC_011757  Mchl_4958  nitrate ABC transporter, inner membrane subunit  31.63 
 
 
285 aa  110  1.0000000000000001e-23  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.413837  normal  0.165118 
 
 
-
 
NC_012791  Vapar_3523  nitrate ABC transporter, inner membrane subunit  31.63 
 
 
309 aa  110  1.0000000000000001e-23  Variovorax paradoxus S110  Bacteria  normal  0.293551  n/a   
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  36.3 
 
 
288 aa  110  1.0000000000000001e-23  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_011726  PCC8801_4395  nitrate ABC transporter, inner membrane subunit  29.95 
 
 
277 aa  110  1.0000000000000001e-23  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_012917  PC1_2732  nitrate ABC transporter, inner membrane subunit  30.89 
 
 
304 aa  110  2.0000000000000002e-23  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0882865  n/a   
 
 
-
 
NC_011145  AnaeK_3807  binding-protein-dependent transport systems inner membrane component  42.75 
 
 
269 aa  109  2.0000000000000002e-23  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3526  nitrate ABC transporter, inner membrane subunit  28.79 
 
 
280 aa  109  2.0000000000000002e-23  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.471487 
 
 
-
 
NC_009512  Pput_0254  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
265 aa  110  2.0000000000000002e-23  Pseudomonas putida F1  Bacteria  normal  0.293544  normal  0.0445843 
 
 
-
 
NC_009656  PSPA7_1684  ABC transporter permease  33.91 
 
 
262 aa  109  2.0000000000000002e-23  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_3750  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  42.75 
 
 
269 aa  109  2.0000000000000002e-23  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2638  ABC sulfonate transporter, inner membrane subunit  35 
 
 
279 aa  109  2.0000000000000002e-23  Burkholderia xenovorans LB400  Bacteria  normal  0.0950643  hitchhiker  0.0000361652 
 
 
-
 
NC_012912  Dd1591_1439  nitrate ABC transporter, inner membrane subunit  32.42 
 
 
310 aa  110  2.0000000000000002e-23  Dickeya zeae Ech1591  Bacteria  normal  0.062597  n/a   
 
 
-
 
NC_011891  A2cp1_3891  binding-protein-dependent transport systems inner membrane component  42.75 
 
 
269 aa  109  3e-23  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4973  binding-protein-dependent transport systems inner membrane component  33.91 
 
 
265 aa  109  3e-23  Pseudomonas putida W619  Bacteria  normal  0.0722896  normal  0.022026 
 
 
-
 
NC_013889  TK90_0666  nitrate ABC transporter, inner membrane subunit  30 
 
 
311 aa  109  3e-23  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0569164  decreased coverage  0.0039857 
 
 
-
 
NC_014150  Bmur_0153  binding-protein-dependent transport systems inner membrane component  28.5 
 
 
277 aa  109  3e-23  Brachyspira murdochii DSM 12563  Bacteria  normal  0.589472  n/a   
 
 
-
 
NC_007908  Rfer_2555  nitrate transport permease  29.74 
 
 
314 aa  109  3e-23  Rhodoferax ferrireducens T118  Bacteria  normal  0.162104  n/a   
 
 
-
 
NC_009832  Spro_2908  nitrate ABC transporter, inner membrane subunit  30.98 
 
 
298 aa  108  4.0000000000000004e-23  Serratia proteamaculans 568  Bacteria  normal  0.950821  normal 
 
 
-
 
NC_012850  Rleg_2304  binding-protein-dependent transport systems inner membrane component  32.2 
 
 
278 aa  108  4.0000000000000004e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.37818 
 
 
-
 
NC_013510  Tcur_1385  binding-protein-dependent transport systems inner membrane component  31.44 
 
 
284 aa  108  4.0000000000000004e-23  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0616622  n/a   
 
 
-
 
CP001509  ECD_00317  taurine transporter subunit  30.48 
 
 
275 aa  108  5e-23  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_010625  Bphy_6203  binding-protein-dependent transport systems inner membrane component  35.36 
 
 
284 aa  108  5e-23  Burkholderia phymatum STM815  Bacteria  normal  0.780444  normal  0.280504 
 
 
-
 
NC_010468  EcolC_3261  taurine transporter subunit  30.48 
 
 
275 aa  108  5e-23  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_011832  Mpal_1076  binding-protein-dependent transport systems inner membrane component  29.81 
 
 
269 aa  108  5e-23  Methanosphaerula palustris E1-9c  Archaea  normal  0.406887  normal  0.454808 
 
 
-
 
NC_008463  PA14_19570  ABC transporter permease  33.33 
 
 
262 aa  108  5e-23  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0263  binding-protein-dependent transport systems inner membrane component  34.1 
 
 
265 aa  108  5e-23  Pseudomonas putida GB-1  Bacteria  normal  0.791848  normal 
 
 
-
 
NC_012892  B21_00321  hypothetical protein  30.48 
 
 
275 aa  108  5e-23  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0355  putative ABC aliphatic sulfonates transporter, permease subunit  32.2 
 
 
264 aa  108  7.000000000000001e-23  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_2935  binding-protein-dependent transport systems inner membrane component  29.79 
 
 
252 aa  108  7.000000000000001e-23  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_0423  binding-protein-dependent transport systems inner membrane component  32.2 
 
 
264 aa  108  7.000000000000001e-23  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  31.61 
 
 
254 aa  108  8.000000000000001e-23  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_007947  Mfla_0326  nitrate transport permease  33.33 
 
 
295 aa  108  8.000000000000001e-23  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_2218  binding-protein-dependent transport systems inner membrane component  29.5 
 
 
290 aa  107  8.000000000000001e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.484673 
 
 
-
 
NC_008942  Mlab_0377  hypothetical protein  34.07 
 
 
253 aa  108  8.000000000000001e-23  Methanocorpusculum labreanum Z  Archaea  normal  normal 
 
 
-
 
NC_004578  PSPTO_5321  taurine ABC transporter, permease protein  31.82 
 
 
285 aa  107  1e-22  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0831  nitrate transport permease  30.96 
 
 
312 aa  107  1e-22  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.0203602 
 
 
-
 
NC_007955  Mbur_2132  ABC nitrate/sulfonate/bicarbonate transporter, inner membrane subunit  29.5 
 
 
262 aa  107  1e-22  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_014158  Tpau_3138  binding-protein-dependent transport systems inner membrane component  39.86 
 
 
286 aa  107  1e-22  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.453695  n/a   
 
 
-
 
NC_009483  Gura_3883  binding-protein-dependent transport systems inner membrane component  28.79 
 
 
262 aa  107  1e-22  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0676  binding-protein-dependent transport systems inner membrane component  30.43 
 
 
279 aa  107  1e-22  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.30868 
 
 
-
 
CP001637  EcDH1_3240  binding-protein-dependent transport systems inner membrane component  29.05 
 
 
275 aa  106  2e-22  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0391  taurine transporter subunit  30.95 
 
 
275 aa  107  2e-22  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0260  taurine transporter subunit  31.55 
 
 
284 aa  105  3e-22  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2500  aliphatic sulfonate ABC transporter, permease protein  33.71 
 
 
268 aa  106  3e-22  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3936  taurine transporter subunit  31.55 
 
 
284 aa  105  3e-22  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
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