| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0831 |
|---|
| Symbol | |
|---|
| ID | 3569456 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 902729 |
|---|
| End bp | 903667 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637679287 |
|---|
| Product | nitrate transport permease |
|---|
| Protein accession | YP_284057 |
|---|
| Protein GI | 71906470 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01183] nitrate ABC transporter, permease protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 73 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0203602 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAA TGACGATGAT TGGTGAGTTC GGCCTAGAGA AGCCGGTTGA CCGGAACATA
AGCAGCCAGC CGGTCGCGGA AATCGCTGCC GAGCCAGCCA AGGAAATAAA AATGGAAAAA
ACTGCAACCC TGCCGGCCAT CGAGCCGGGC ACGCCGTTCG CCGAGAAACT GGCCAACTTT
GGCCGCGCTA TTTTGCCGCC GGTATTGGGT ATGGTGGTGC TGATCGGCAT CTGGTTCATC
GCCACCATGA AGGGGGGCAG CATTCCCGGA CCGCTGCAAA CCTGGGATGC CGCTACCGTG
CTGTTCGCCG ACCCGTTCTA CCGCAACGGT CCGAACGACC AAGGTATCGG CTGGAATGTG
CTGTCTTCGC TGCAGCGCGT CGGTATCGGT TTCGGCTTCG CGGCGCTGGT CGGTATCCCG
CTCGGTTTCA TTCTCGGCCG CTCGGCCTTC CTGTCGGCGA TGATCAACCC GATCATCAGC
CTGCTGCGTC CGGTCTCGCC GCTCGCTTGG CTGCCGATTG GCCTGCTGGT TTTCAAGAAG
GCCGACCCGG CGGCGACCTA CACCATCTTC ATCTGCTCGA TCTGGCCGAT GATCATGAAC
ACGGCGCAAG GCGTCCAGCG CGTGCCGCAG GATTACCTGA ACGTCGCTCG CGTGCTGGCC
TTGTCCGAAT GGAAGGTGGT TACCAAAATC CTGTTCCCGG CCGTGCTGCC CTACATGCTG
ACCGGCATCC GCCTGTCGAT CGGTACCGCC TGGCTGGTCA TCGTCGCCGC CGAAATGCTC
ACTGGCGGCG TCGGCATCGG CTTCTGGGTG TGGGACGAGT GGAATAACCT GAAGGTCGAG
CACATCATCA TCGCCATCTT CGTCATCGGC ATCGTCGGCC TGATCCTCGA GCAGGCGCTG
ATCCTGCTGG CCAAGAAGCT GACCAAAGAA TCCGCCTGA
|
|---|
| Protein sequence | MSVMTMIGEF GLEKPVDRNI SSQPVAEIAA EPAKEIKMEK TATLPAIEPG TPFAEKLANF
GRAILPPVLG MVVLIGIWFI ATMKGGSIPG PLQTWDAATV LFADPFYRNG PNDQGIGWNV
LSSLQRVGIG FGFAALVGIP LGFILGRSAF LSAMINPIIS LLRPVSPLAW LPIGLLVFKK
ADPAATYTIF ICSIWPMIMN TAQGVQRVPQ DYLNVARVLA LSEWKVVTKI LFPAVLPYML
TGIRLSIGTA WLVIVAAEML TGGVGIGFWV WDEWNNLKVE HIIIAIFVIG IVGLILEQAL
ILLAKKLTKE SA
|
|---|
| |