More than 300 homologs were found in PanDaTox collection
for query gene Ping_3159 on replicon NC_008709
Organism: Psychromonas ingrahamii 37



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008709  Ping_3159  ABC transporter binding protein inner membrane protein  100 
 
 
393 aa  788    Psychromonas ingrahamii 37  Bacteria  normal  normal 
 
 
-
 
NC_008243  Meso_4486  binding-protein-dependent transport systems inner membrane component  30.9 
 
 
330 aa  180  2.9999999999999997e-44  Chelativorans sp. BNC1  Bacteria  normal  0.394023  n/a   
 
 
-
 
NC_013521  Sked_14290  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  31.75 
 
 
329 aa  173  5.999999999999999e-42  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0596  binding-protein-dependent transport systems inner membrane component  32.96 
 
 
330 aa  172  6.999999999999999e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_2453  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
329 aa  172  1e-41  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.925084  normal  0.312586 
 
 
-
 
NC_010483  TRQ2_0886  binding-protein-dependent transport systems inner membrane component  31.74 
 
 
328 aa  165  1.0000000000000001e-39  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011368  Rleg2_5448  binding-protein-dependent transport systems inner membrane component  31.48 
 
 
328 aa  165  1.0000000000000001e-39  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  decreased coverage  0.00290712 
 
 
-
 
NC_009486  Tpet_0864  binding-protein-dependent transport systems inner membrane component  31.74 
 
 
328 aa  165  1.0000000000000001e-39  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4594  binding-protein-dependent transport systems inner membrane component  29.61 
 
 
332 aa  165  1.0000000000000001e-39  Sinorhizobium medicae WSM419  Bacteria  normal  0.949619  normal 
 
 
-
 
NC_012848  Rleg_5179  binding-protein-dependent transport systems inner membrane component  31.48 
 
 
328 aa  165  1.0000000000000001e-39  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.687314  normal  0.260687 
 
 
-
 
NC_011661  Dtur_1707  binding-protein-dependent transport systems inner membrane component  31.74 
 
 
327 aa  164  2.0000000000000002e-39  Dictyoglomus turgidum DSM 6724  Bacteria  decreased coverage  0.0000000370081  n/a   
 
 
-
 
NC_009621  Smed_5557  binding-protein-dependent transport systems inner membrane component  31.46 
 
 
328 aa  159  7e-38  Sinorhizobium medicae WSM419  Bacteria  normal  0.621423  normal  0.0366433 
 
 
-
 
NC_012858  Rleg_7125  binding-protein-dependent transport systems inner membrane component  31.28 
 
 
332 aa  158  1e-37  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.483809  normal  0.155681 
 
 
-
 
NC_011366  Rleg2_5972  binding-protein-dependent transport systems inner membrane component  30.73 
 
 
332 aa  157  3e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.66552  normal  0.21412 
 
 
-
 
NC_011989  Avi_3929  ABC transporter membrane spanning protein (oligopeptide)  30.83 
 
 
332 aa  156  6e-37  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5259  binding-protein-dependent transport systems inner membrane component  30.73 
 
 
333 aa  156  7e-37  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_009486  Tpet_1683  binding-protein-dependent transport systems inner membrane component  31.55 
 
 
327 aa  154  2e-36  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.0000273599  n/a   
 
 
-
 
NC_012850  Rleg_3375  binding-protein-dependent transport systems inner membrane component  31.93 
 
 
328 aa  154  2e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  decreased coverage  0.00209232  normal  0.0480066 
 
 
-
 
NC_010483  TRQ2_0509  binding-protein-dependent transport systems inner membrane component  31.55 
 
 
327 aa  154  2e-36  Thermotoga sp. RQ2  Bacteria  normal  0.0910485  n/a   
 
 
-
 
NC_011988  Avi_5699  ABC transporter membrane spanning protein (oligopeptide)  29.1 
 
 
327 aa  154  2.9999999999999998e-36  Agrobacterium vitis S4  Bacteria  normal  0.0252968  n/a   
 
 
-
 
NC_011988  Avi_5516  ABC transporter membrane spanning protein (oligopeptide)  29.21 
 
 
328 aa  154  2.9999999999999998e-36  Agrobacterium vitis S4  Bacteria  normal  0.472347  n/a   
 
 
-
 
NC_009523  RoseRS_3049  binding-protein-dependent transport systems inner membrane component  29.25 
 
 
328 aa  146  7.0000000000000006e-34  Roseiflexus sp. RS-1  Bacteria  normal  0.111848  normal  0.36544 
 
 
-
 
NC_009767  Rcas_2111  binding-protein-dependent transport systems inner membrane component  29.25 
 
 
328 aa  142  9.999999999999999e-33  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.2949  normal 
 
 
-
 
NC_013946  Mrub_1662  binding-protein-dependent transport systems inner membrane component  28.29 
 
 
322 aa  139  7e-32  Meiothermus ruber DSM 1279  Bacteria  normal  0.161485  normal  0.148489 
 
 
-
 
NC_009767  Rcas_2423  binding-protein-dependent transport systems inner membrane component  29.3 
 
 
327 aa  139  1e-31  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.772391  normal  0.978149 
 
 
-
 
NC_010511  M446_6477  binding-protein-dependent transport systems inner membrane component  30.33 
 
 
341 aa  136  7.000000000000001e-31  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1804  binding-protein-dependent transport systems inner membrane component  27.37 
 
 
327 aa  132  1.0000000000000001e-29  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011894  Mnod_7229  binding-protein-dependent transport systems inner membrane component  29.78 
 
 
341 aa  131  2.0000000000000002e-29  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0256159  n/a   
 
 
-
 
NC_012858  Rleg_6876  binding-protein-dependent transport systems inner membrane component  26.91 
 
 
335 aa  130  3e-29  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0537311  normal 
 
 
-
 
NC_010505  Mrad2831_2831  binding-protein-dependent transport systems inner membrane component  28.85 
 
 
338 aa  127  4.0000000000000003e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0285608  normal  0.325568 
 
 
-
 
NC_009523  RoseRS_2809  binding-protein-dependent transport systems inner membrane component  27.04 
 
 
327 aa  125  1e-27  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_2593  binding-protein-dependent transport systems inner membrane component  27.25 
 
 
322 aa  125  1e-27  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_009620  Smed_4141  binding-protein-dependent transport systems inner membrane component  25.69 
 
 
337 aa  125  1e-27  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.633745 
 
 
-
 
NC_011366  Rleg2_5906  binding-protein-dependent transport systems inner membrane component  25.28 
 
 
335 aa  123  7e-27  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.188987  normal  0.479782 
 
 
-
 
NC_010003  Pmob_1327  binding-protein-dependent transport systems inner membrane component  26.76 
 
 
326 aa  122  9.999999999999999e-27  Petrotoga mobilis SJ95  Bacteria  hitchhiker  0.00111488  n/a   
 
 
-
 
NC_011988  Avi_5118  ABC transporter membrane spanning protein (oligopeptide )  24.65 
 
 
337 aa  121  1.9999999999999998e-26  Agrobacterium vitis S4  Bacteria  normal  0.296521  n/a   
 
 
-
 
NC_008254  Meso_3728  binding-protein-dependent transport systems inner membrane component  28.06 
 
 
319 aa  120  3e-26  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013161  Cyan8802_2317  binding-protein-dependent transport systems inner membrane component  26.26 
 
 
320 aa  120  6e-26  Cyanothece sp. PCC 8802  Bacteria  normal  normal  0.766968 
 
 
-
 
NC_011726  PCC8801_2266  binding-protein-dependent transport systems inner membrane component  26.26 
 
 
320 aa  120  6e-26  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008312  Tery_0434  binding-protein-dependent transport systems inner membrane component  25.14 
 
 
358 aa  118  9.999999999999999e-26  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.0891876 
 
 
-
 
NC_008043  TM1040_3684  binding-protein-dependent transport systems inner membrane component  28.41 
 
 
342 aa  117  3e-25  Ruegeria sp. TM1040  Bacteria  normal  normal  0.400561 
 
 
-
 
NC_014248  Aazo_2322  binding-protein-dependent transporter inner membrane protein  26.33 
 
 
348 aa  117  3.9999999999999997e-25  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0553  binding-protein-dependent transport systems inner membrane component  25.07 
 
 
322 aa  116  5e-25  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_0569  oligopeptide ABC transporter, permease  25.07 
 
 
321 aa  116  6e-25  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_0779  binding-protein-dependent transport systems inner membrane component  25.41 
 
 
313 aa  115  1.0000000000000001e-24  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_2469  binding-protein dependent transport system inner membrane protein  26.36 
 
 
345 aa  115  2.0000000000000002e-24  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_0572  binding-protein-dependent transport systems inner membrane component  23.94 
 
 
322 aa  114  3e-24  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3115  binding-protein-dependent transport systems inner membrane component  25.48 
 
 
322 aa  112  9e-24  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008010  Dgeo_2511  binding-protein-dependent transport systems inner membrane component  27.04 
 
 
323 aa  112  1.0000000000000001e-23  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_013946  Mrub_2794  binding-protein-dependent transport systems inner membrane component  25.21 
 
 
315 aa  110  4.0000000000000004e-23  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0004  binding-protein dependent transport system inner membrane protein  24.66 
 
 
320 aa  110  6e-23  Anabaena variabilis ATCC 29413  Bacteria  normal  0.101832  normal 
 
 
-
 
NC_010184  BcerKBAB4_0209  binding-protein-dependent transport systems inner membrane component  26.48 
 
 
318 aa  109  7.000000000000001e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_008942  Mlab_0719  hypothetical protein  25.42 
 
 
316 aa  109  8.000000000000001e-23  Methanocorpusculum labreanum Z  Archaea  normal  normal  0.870853 
 
 
-
 
NC_011772  BCG9842_B5079  oligopeptide ABC transporter, permease protein  26.2 
 
 
318 aa  109  9.000000000000001e-23  Bacillus cereus G9842  Bacteria  normal  0.823719  normal 
 
 
-
 
NC_004311  BRA0408  peptide ABC transporter, permease protein  26.4 
 
 
319 aa  108  2e-22  Brucella suis 1330  Bacteria  normal  0.599742  n/a   
 
 
-
 
NC_009486  Tpet_0389  binding-protein-dependent transport systems inner membrane component  26.1 
 
 
321 aa  108  2e-22  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0405  binding-protein-dependent transport systems inner membrane component  26.1 
 
 
321 aa  108  2e-22  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_0249  oligopeptide ABC transporter, permease protein  25.07 
 
 
318 aa  107  3e-22  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0210  oligopeptide ABC transporter, permease  25.07 
 
 
318 aa  107  4e-22  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0232  oligopeptide ABC transporter permease protein  25.07 
 
 
318 aa  107  4e-22  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008146  Mmcs_3392  binding-protein-dependent transport systems inner membrane component  27.43 
 
 
322 aa  107  4e-22  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3454  binding-protein-dependent transport systems inner membrane component  27.43 
 
 
322 aa  107  4e-22  Mycobacterium sp. KMS  Bacteria  normal  0.0476049  normal  0.20897 
 
 
-
 
NC_009077  Mjls_3402  binding-protein-dependent transport systems inner membrane component  27.43 
 
 
322 aa  107  4e-22  Mycobacterium sp. JLS  Bacteria  normal  normal  0.414511 
 
 
-
 
NC_008254  Meso_1312  binding-protein-dependent transport systems inner membrane component  24.44 
 
 
318 aa  107  5e-22  Chelativorans sp. BNC1  Bacteria  normal  0.823001  n/a   
 
 
-
 
NC_005957  BT9727_0206  oligopeptide ABC transporter, permease  25.63 
 
 
318 aa  106  6e-22  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_2985  binding-protein-dependent transport systems inner membrane component  26.2 
 
 
313 aa  106  7e-22  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.348462  n/a   
 
 
-
 
NC_013131  Caci_8320  binding-protein-dependent transport systems inner membrane component  25.14 
 
 
315 aa  106  7e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.951594  normal  0.741309 
 
 
-
 
NC_010718  Nther_2757  binding-protein-dependent transport systems inner membrane component  25.84 
 
 
306 aa  105  9e-22  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A0267  oligopeptide ABC transporter, permease protein  25.84 
 
 
318 aa  105  1e-21  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0351  peptide ABC transporter, permease protein  26.12 
 
 
319 aa  105  1e-21  Brucella ovis ATCC 25840  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_1355  binding-protein-dependent transport systems inner membrane component  25.35 
 
 
319 aa  104  2e-21  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_4598  binding-protein-dependent transport systems inner membrane component  25.83 
 
 
319 aa  104  2e-21  Roseiflexus sp. RS-1  Bacteria  normal  0.930375  normal 
 
 
-
 
NC_013161  Cyan8802_4395  binding-protein-dependent transport systems inner membrane component  26.45 
 
 
349 aa  104  2e-21  Cyanothece sp. PCC 8802  Bacteria  normal  0.176103  hitchhiker  0.0000268959 
 
 
-
 
NC_011726  PCC8801_4332  binding-protein-dependent transport systems inner membrane component  26.45 
 
 
349 aa  104  2e-21  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A0246  oligopeptide ABC transporter, permease protein  26.16 
 
 
307 aa  105  2e-21  Bacillus cereus B4264  Bacteria  normal  0.0542782  n/a   
 
 
-
 
NC_013202  Hmuk_1597  binding-protein-dependent transport systems inner membrane component  26.55 
 
 
332 aa  104  3e-21  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.474892  normal 
 
 
-
 
NC_008043  TM1040_3436  binding-protein-dependent transport systems inner membrane component  25.35 
 
 
315 aa  104  3e-21  Ruegeria sp. TM1040  Bacteria  normal  0.24032  normal  0.535319 
 
 
-
 
NC_009436  Ent638_1325  binding-protein-dependent transport systems inner membrane component  26.52 
 
 
311 aa  104  3e-21  Enterobacter sp. 638  Bacteria  normal  normal  0.642024 
 
 
-
 
NC_007802  Jann_3817  binding-protein-dependent transport systems inner membrane component  25.62 
 
 
318 aa  103  5e-21  Jannaschia sp. CCS1  Bacteria  normal  0.950676  normal  0.209619 
 
 
-
 
NC_011981  Avi_7517  ABC transporter membrane spanning protein (dipeptide)  23.94 
 
 
317 aa  103  7e-21  Agrobacterium vitis S4  Bacteria  normal  0.636938  n/a   
 
 
-
 
NC_007355  Mbar_A3675  oligopeptide ABC transporter, permease  23.66 
 
 
316 aa  102  8e-21  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal  0.0490538 
 
 
-
 
NC_011366  Rleg2_5762  binding-protein-dependent transport systems inner membrane component  26.76 
 
 
313 aa  102  9e-21  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  hitchhiker  0.0000799384  normal 
 
 
-
 
NC_010511  M446_0891  binding-protein-dependent transport systems inner membrane component  25.63 
 
 
319 aa  102  1e-20  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_4659  binding-protein-dependent transport systems inner membrane component  26.16 
 
 
337 aa  102  1e-20  Xanthobacter autotrophicus Py2  Bacteria  normal  0.678107  normal  0.316578 
 
 
-
 
NC_009718  Fnod_1563  binding-protein-dependent transport systems inner membrane component  25.84 
 
 
321 aa  102  1e-20  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.0231928  n/a   
 
 
-
 
NC_009674  Bcer98_0220  binding-protein-dependent transport systems inner membrane component  24.79 
 
 
318 aa  102  1e-20  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_0873  binding-protein-dependent transport systems inner membrane component  26.46 
 
 
320 aa  102  2e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0307537  n/a   
 
 
-
 
NC_005945  BAS0219  oligopeptide ABC transporter permease  25 
 
 
307 aa  100  3e-20  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1446  binding-protein-dependent transport systems inner membrane component  23.81 
 
 
328 aa  101  3e-20  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  hitchhiker  0.000323084  n/a   
 
 
-
 
NC_011894  Mnod_0489  binding-protein-dependent transport systems inner membrane component  24.32 
 
 
336 aa  101  3e-20  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0242  oligopeptide ABC transporter, permease protein  25 
 
 
307 aa  100  3e-20  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_010505  Mrad2831_5082  binding-protein-dependent transport systems inner membrane component  25.07 
 
 
314 aa  100  3e-20  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0845824 
 
 
-
 
NC_012858  Rleg_6669  binding-protein-dependent transport systems inner membrane component  27.17 
 
 
313 aa  100  3e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  hitchhiker  0.000789572  normal  0.0157107 
 
 
-
 
NC_010511  M446_1691  alkaline phosphatase  24.25 
 
 
336 aa  100  5e-20  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.218764 
 
 
-
 
NC_010718  Nther_2404  binding-protein-dependent transport systems inner membrane component  24.23 
 
 
308 aa  100  5e-20  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  hitchhiker  0.0000000311261  normal 
 
 
-
 
NC_009632  SaurJH1_1012  binding-protein-dependent transport systems inner membrane component  24.44 
 
 
320 aa  99.8  8e-20  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.0445446  n/a   
 
 
-
 
NC_009487  SaurJH9_0993  binding-protein-dependent transport systems inner membrane component  24.44 
 
 
320 aa  99.8  8e-20  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2266  binding-protein dependent transport system inner membrane protein  25.77 
 
 
305 aa  99.8  9e-20  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0437136  normal  0.510815 
 
 
-
 
NC_010001  Cphy_0806  binding-protein-dependent transport systems inner membrane component  24.12 
 
 
334 aa  99  1e-19  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1411  binding-protein-dependent transport systems inner membrane component  25.83 
 
 
319 aa  99.4  1e-19  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
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