| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_3929 |
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| Symbol | |
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| ID | 7387286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 3296314 |
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| End bp | 3297312 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643652670 |
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| Product | ABC transporter membrane spanning protein (oligopeptide) |
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| Protein accession | YP_002550851 |
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| Protein GI | 222149894 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGCT ATATTCTCTG GCGCATTGCC GTGATGATCC CGACGCTGAT CATGATTTCC
ATGCTGGTCT TCACCATTAT CGAGCTGCCA CCCGGTGATT ACTTTGAAAG CTATGTCGAG
GAAATGCGGG CCATTGGCGA AAAGGCCGAT TTGCAGGAAA TCGAGGATTT GAAGGCGCGC
TACGGTTTCG ATCAGCCTGC GCCGATCCGC TATTTCAACT GGGTCACCGG CTTTGTGCAG
GGGGATTTCG GCTATTCCTT CGAATACCGC ATGCCAGTGG CCGATGTGGT CGGCGACCGG
GTCTGGCTCA CCATCCTGGT TTCCACCGTC ACCATCGCTG TCACCTGGCT GCTGGCCTTT
CCAATCGGCA TCTATTCCGC CACCCATCAA TATAGCTGGG GCGATTACGG GTTGACCTTG
CTGGGCCTGA TCGGCATCGC CGTGCCAAAC TTCATCCTGG CGCTTGTCAT GATGTATTTC
GCCAATATCT GGTTCGGCAT TTCCATCGGC CATCTGATGG ACCAGCGCTT TCTGGGTCAG
GCGATGAGCT GGGACAAGTT CAAGTCTATC CTCGAACATT TGTGGATTCC GGTCATCATC
ATCGGCACGG CGGGCACCGC TGGCATGGTG CGCCGTGTCA GGGCCAATCT GCTGGACGAG
CTGCACAAGC AATATGTGAT GACGGCGCGC GCCAAGGGGC TGCATCCGTT TCGGGTGCTG
ATCAAATATC CGCTGCGCAT GTCGTTGAAT TTCTTCATTT CCGATATCGG CTCCATCCTG
CCGACAATCA TTTCCGGGGC GGAAATCACC GCCGTCGTGC TGTCGCTGGA AACCACCGGC
CCGATGCTGA TCCGGGCGCT TCAGGACCAG GACATGTATC TGGCCGGATC GTTTCTGATG
TTTTTGGCGG TGCTAACGGT CATCGGCGTG TTGATTTCGG ATATCGCGCT GGCGCTGCTT
GATCCGCGCA TCCGCTTGCA GGGAGGGCGC AGCAAATGA
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| Protein sequence | MIRYILWRIA VMIPTLIMIS MLVFTIIELP PGDYFESYVE EMRAIGEKAD LQEIEDLKAR
YGFDQPAPIR YFNWVTGFVQ GDFGYSFEYR MPVADVVGDR VWLTILVSTV TIAVTWLLAF
PIGIYSATHQ YSWGDYGLTL LGLIGIAVPN FILALVMMYF ANIWFGISIG HLMDQRFLGQ
AMSWDKFKSI LEHLWIPVII IGTAGTAGMV RRVRANLLDE LHKQYVMTAR AKGLHPFRVL
IKYPLRMSLN FFISDIGSIL PTIISGAEIT AVVLSLETTG PMLIRALQDQ DMYLAGSFLM
FLAVLTVIGV LISDIALALL DPRIRLQGGR SK
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