| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbar_A3675 |
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| Symbol | |
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| ID | 3624619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanosarcina barkeri str. Fusaro |
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| Kingdom | Archaea |
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| Replicon accession | NC_007355 |
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| Strand | - |
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| Start bp | 4732629 |
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| End bp | 4733579 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637702507 |
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| Product | oligopeptide ABC transporter, permease |
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| Protein accession | YP_307118 |
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| Protein GI | 73671103 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0490538 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAATG AGTATTTCAT CCGCCGGGCT CTGTATCTCA TCCCGGTCCT CATATTTACC
TCATTCATGA GTTTTTCACT CATCTACATC GCGCCGGGAG ACCCAGCAGA AATTATGATG
ACGAGTCCTT CTGGCGGATA TGATGAAGCA GCTGTTGAAG CTTTCCGCGT AGCCCACGGT
CTTGACCAGC CGTTTTACAT CCAGTATCTG AACTGGCTCA AAGGCGCAGC TGTCGGAGAT
TTTGGCTACT CGTACATGAG CGAACAGCCG GTATTTGATA CTGTTCTGAC CGCATTCAAA
AATACGCTGA AACTTTCCGT TCTCGCGCTT GCAATTGCTC TTGTTATCGC TGTCCCTCTC
GGCGTAGTCT CAGCTCTGAA ACATAACACC ATTGTTGACG ACGCCTGTCG CTTTGGCGCT
CTTCTCGGAG TGTCCATTCC AAACTTCTGG CAGGCCTATC TGATGATAAT TTTCTTCTCG
GTAATCATTC ACTGGCTCCC AGCATCCGGA TTCGGACACG GGACAGATAT CAGCTACATG
ATTCTGCCGG CGGCTGTTCT TGGGACAGGG TCAGCGGCTG TAATGATGCG GATGATCCGT
TCAAGCATGC TGGATGTCAT GGGAAAGGAG TATATCCAGA CCGCACGCGG AAAAGGGCTT
TCTGAAAAAA TCGTTGTCAT CAGACACGCA TTGAAAAATG CACTTGTTCC GGTTATTACG
GTGGTTGGGC TGTCGATTGG TTTTCTCTTA AACGGCTCGG TTGTTGTTGA GACAATTTTC
GGATGGTCGG GTATTGGAAA TCTTGTGGTG AACTCAATTC TTTCCCACGA TTATATGATG
GTACAGGGCT CGGTGCTCTT TGTTGCAGTT ATTTTCCTTC TGACCAATTT CTTTGTAGAT
CTGGTCTACG TTTGGGCAAA CCCGGAGATA CGCTATGATA GAACTTCTTA A
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| Protein sequence | MLNEYFIRRA LYLIPVLIFT SFMSFSLIYI APGDPAEIMM TSPSGGYDEA AVEAFRVAHG
LDQPFYIQYL NWLKGAAVGD FGYSYMSEQP VFDTVLTAFK NTLKLSVLAL AIALVIAVPL
GVVSALKHNT IVDDACRFGA LLGVSIPNFW QAYLMIIFFS VIIHWLPASG FGHGTDISYM
ILPAAVLGTG SAAVMMRMIR SSMLDVMGKE YIQTARGKGL SEKIVVIRHA LKNALVPVIT
VVGLSIGFLL NGSVVVETIF GWSGIGNLVV NSILSHDYMM VQGSVLFVAV IFLLTNFFVD
LVYVWANPEI RYDRTS
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