Gene Ndas_5259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5259 
Symbol 
ID9249157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp422712 
End bp423713 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content69% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003683145 
Protein GI297564172 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCGCT ACGTGATCCG CCGCCTGCTG TACATGGTCC CGACCCTGTT CGCGATCTCG 
CTGGTCGCGT TCCTGGTCAT CCAGCTGCCC CCGGGCGACT TCCTCACCGC CTACATCGCC
GAGCTGTCCG CGCAGGGGCA GGGCGTGGAC GGCGCCCAGA TCCGCGCCCT GGAGGAGAGG
TACGGACTCG ACGACCCCTT CCTCGTCCAG TACTGGAACT GGATCTCGGG GATCGTCCTG
CGGGGCGACT TCGGCCAGTC CTTCCAGTAC CACCGCGAGG TGGCCGACCT GATGTGGGAC
CGGATCGGCC TCACCCTGGC ACTGGCCCTG GTCACCCTGC TGCTGAGCTG GGCGATCGCC
TTCCCGATCG GGGTGTACTC GGCGGTCCGC CAGTACTCGC TGGGCGACTA CGCGGTGACG
TTCGTCGGGT TCGTCGGCCT GGCCACGCCG AACTTCATGC TCGCGCTGAT CTTCGCCTGG
GTGTCCTTCC GCTACTTCGG ACAGAGCGTG GGCGGCATCG TCTCGCGCGA GTACGCCGAC
GCCGCCTGGA ACCTGGGCAA GGTCCTGGAC GTGGTGTCCA ACCTGTGGAT ACCGGTGCTC
ATCATCGGCA CCGCGGGCAC GGCCGCGCTC GTGCGCGTGC TGCGCGCCAA CCTCCTGGAC
GAGCTGCGCA AGCCCTACGT CACCACGGCC CGGGCCAGGG GCCTGCCCGA GTGGCGGGTC
ATCCTCAAGT ACCCCGTGCG CATGGCGCTC AGCCCCTTCA TCAGCACCAT CGGCTGGATC
CTGCCCACGC TCGTGGGCGG AGAGGTGATG GTCTCCATCG TGCTGAGCCT GGAGACGACC
GGCCCGCTGC TGGTGGAGGC CCTGCGCAAC CAGGACATGT ACCTGGCCGG GAGCTTCATC
CTCGTCCTCG GCGTGCTGAC GGTCGTCGGC ACCCTGCTGT CCGACCTGCT GCTGGCCTGG
TGGGACCCGC GCATCCGCCA CCACCACGTC GAGAGGGTGT GA
 
Protein sequence
MRRYVIRRLL YMVPTLFAIS LVAFLVIQLP PGDFLTAYIA ELSAQGQGVD GAQIRALEER 
YGLDDPFLVQ YWNWISGIVL RGDFGQSFQY HREVADLMWD RIGLTLALAL VTLLLSWAIA
FPIGVYSAVR QYSLGDYAVT FVGFVGLATP NFMLALIFAW VSFRYFGQSV GGIVSREYAD
AAWNLGKVLD VVSNLWIPVL IIGTAGTAAL VRVLRANLLD ELRKPYVTTA RARGLPEWRV
ILKYPVRMAL SPFISTIGWI LPTLVGGEVM VSIVLSLETT GPLLVEALRN QDMYLAGSFI
LVLGVLTVVG TLLSDLLLAW WDPRIRHHHV ERV