| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5118 |
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| Symbol | |
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| ID | 7380923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | - |
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| Start bp | 107064 |
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| End bp | 108077 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643648776 |
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| Product | ABC transporter membrane spanning protein (oligopeptide ) |
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| Protein accession | YP_002547013 |
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| Protein GI | 222106222 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.296521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAGAT TTCTGCTTGT GCGCATAGCC TCTGCCATTC CTGTGCTGTT CGTTCTCAGC
GTTGTCACCT TTGCCATCAT CAAGGCCCCT CCGGGGGATT ACAGCGACTA CATCCGTTCC
CAGATGATCA ATCAAGGCGG CGCATCGTTT GAAGCCGCCG ATGCGCAGGC GCAGGCCTAT
AAAATTGCCA ATGGGTTGGA TAAACCGATC CCCATCCAAT ACATCAACTG GATCACAGGC
ATTGTCACCC GTGGTGATTT TGGCCACAGC CTGTTCTACA ACAAACCTGT GTCGGAAGTG
GTGGGCGAGC GCTTGCCCCG GACATTGGCG CTGGCGCTGG TTTGCCATAT CCTTGCCTCC
ATCATCGGCA TCACCTTCGG AATTCTGGCC GCGACCCGGC AATATACCTG GGTGGATAGC
CTGCTCTCGG GCATCTCGTT TCTCGGCATG ACCGTGCCAC GCTTTTTGAT GGCGCTGATC
ATCGTCTACA TCATGGTGTT CCATTTCAAT GCTACGGAAA TCAACAGTTT CAATTCCGCC
AAATATGGTG GAGCGCCATG GTCCTTTGCC AAATTCCTCG ACCTCTTGCA GCATGTATGG
CCGGTGATTG CCATCGCCAC CTTTGGCGGG CTGGCCTATA ATATGCGGGT CATGCGCGGC
AATCTGCTGG ATACGCTGAA CGCGCAATAT GTCGAAACCG CCCGCGCCAA GGGCCTCAGC
GAGCGACAGG TGATCTTGCG CCATGCGGTG CCAAATGCGC TGCATCCGCT GATCATGTAT
CAGGGCGTGG TACTGCCCTA TATGCTCACC GGCGAGATTG AAACGGCCAT TATTTTTGCC
CTGCCAACCG TTGGTCCAGC CATTGTTGGC TCCATGTGGG TGGGCGATGT CTATGTCACG
GCAACCTTCA TGCTGGTTTT GTCGGCCACG TTGATTGTGG GCAATATCAT TGCCGACATG
CTGCTCGCAC TTCTTGATCC ACGGGTAAGA TTGGGCGGAG GAGCACACGC ATGA
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| Protein sequence | MFRFLLVRIA SAIPVLFVLS VVTFAIIKAP PGDYSDYIRS QMINQGGASF EAADAQAQAY
KIANGLDKPI PIQYINWITG IVTRGDFGHS LFYNKPVSEV VGERLPRTLA LALVCHILAS
IIGITFGILA ATRQYTWVDS LLSGISFLGM TVPRFLMALI IVYIMVFHFN ATEINSFNSA
KYGGAPWSFA KFLDLLQHVW PVIAIATFGG LAYNMRVMRG NLLDTLNAQY VETARAKGLS
ERQVILRHAV PNALHPLIMY QGVVLPYMLT GEIETAIIFA LPTVGPAIVG SMWVGDVYVT
ATFMLVLSAT LIVGNIIADM LLALLDPRVR LGGGAHA
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