| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_2111 |
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| Symbol | |
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| ID | 5539591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 2712985 |
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| End bp | 2713971 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640894245 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001432214 |
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| Protein GI | 156742085 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.2949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACAT TCCTGGCTCG GCGCATTGTT TATATGATTA TCACCATGAT CCTGGCGTCG
TTCATCGGGT TCTTCCTCAT TGAACTGCCG CCTGGTTCGA TTGTGGACAT CAAGATCGAT
CAGTTGCGCG CGCAGGGCGG TAATGTGCCC CAGGATCAGA TTGAAGCGCT CAAGCGACGC
TACGGCGTCG ATGATCCGTT GCACATCAAG TACTGGAAGT GGGTTTCACG CACATTGCAG
GGCGACTTCG GCACATCGTT CGAGACTGAT ACGCCGGTGG CCGGCATCAT CGCGCAGCGC
CTGCCTATCA CGTTCGCGCT GACGTTTGGA ACGGCGCTGT TCGCATGGCT TATTTCGATC
CCGCTTGGTG TGTACCTCGC AACAAACCGT GGCAGTATAC CGGATTATAT CATCACGTTC
GTGCAGTTTC TCGGCATCGC CATTCCCAAC TTTGCGCTGG CGCTTATTCT GATGGTCTTC
GCTGCGCTTG TGCTGCGGCA GGACGTTGGG CTTGGGTTTT TCTCGCCGCA GTATATCGGC
GCGCCATGGA GTTTCGCCAA GTTTCTCAAT CTGTTGAGCA ATCTGTGGAT CCCGGTGGTA
GTGCTTGGCG CGTCTGCGAC TGCCGGTTTG ACGCGCGTGA TGCGCGCCAA CCTGCTGGAT
GTGCTGAATG CCCAGTATAT TCAAACAGCC CGCGCCAAAG GGTTGCAGGA GAATGCCGTT
ATCTGGAAGC ATGCAGTGCG CAATGCGGTT CACCCACTGG TGATGAGCAT CGGGTATCTG
TTGCCCGCGA TTGTGGTTGG TGATGCGTTA GCGGGGGTTA TCCTCAACCT GCCGACGCTT
GGCGCGCTCT ACCTGCGCGC GCTTCAGGCG ACCGATATGT ATCTCGGCAT CACGATTCTG
ATGATGCAAT GTATGATGCT GTTGCTGGGG AACCTGATTG CCGATCTGTT GCTGGCATGG
GTCGATCCGC GGGTGCGGTT GGAGTGA
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| Protein sequence | MTTFLARRIV YMIITMILAS FIGFFLIELP PGSIVDIKID QLRAQGGNVP QDQIEALKRR
YGVDDPLHIK YWKWVSRTLQ GDFGTSFETD TPVAGIIAQR LPITFALTFG TALFAWLISI
PLGVYLATNR GSIPDYIITF VQFLGIAIPN FALALILMVF AALVLRQDVG LGFFSPQYIG
APWSFAKFLN LLSNLWIPVV VLGASATAGL TRVMRANLLD VLNAQYIQTA RAKGLQENAV
IWKHAVRNAV HPLVMSIGYL LPAIVVGDAL AGVILNLPTL GALYLRALQA TDMYLGITIL
MMQCMMLLLG NLIADLLLAW VDPRVRLE
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