Gene Ping_3159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_3159 
Symbol 
ID4626889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp3889228 
End bp3890409 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content45% 
IMG OID639798263 
ProductABC transporter binding protein inner membrane protein 
Protein accessionYP_944446 
Protein GI119946766 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCG ATTTTTTTAC CAGCACCTGG TTGTTATGGG TTCTGCTCAG TGTGGCAGGC 
TTTCTGTTTT GGCGTAGCCG CAGCAGTAAG TATTTTCTTT ATGTGTTTAA CCGTTACCTG
TTGGCGTTGA TGACCCTGCT AATAGTAAGC GGTATTGTTT TTTCACTGAT GGAAGTCTTA
CCCGGTGATT GTGCTGAAAA GTATATTGCT TATAAAAGCT CTCAAGGGGA AATGATTACT
CAGGCAGATA TTGCGGCTGA AAGATCACGG ATGGGGCTGG ATCGTTCATT GATTGTTCGC
TGGAGCAGCT GGATCACTGA TCTGACCCTG CGAGGAGATT TGGGTTTTAG TTGTGCTAAG
CGTCAGTCGG TTAATATTGC CCTGGGTGAT CGCTTCTGGA TGAGCTTTGG TTTCTGTATT
GCGGGATTAC TTTTTGCCTA TTTGATTGCC GTACCCTTCG GTATTCTTTC AGCTTATATG
ATTAATAAAC CCTGGCTGGA TAAAAATCCA AAGTATAACA AAAAACAGCG CTGGATTAAC
TCTATCGGTT TGAGTTTTAA CAAAGTGCTG GATCTTAAAC TGCGCATGAT TAGTTATCTC
GGGCTGGCAT TACCGAATTT CTTATTAGCC TTGAGCATTA TTTTGCTTTA CGTCTTTGCA
GGTGAACCTG TGCCGACCGG TTTATTTTCC GATCAGTGGA GTGCTGAACC CTGGTTTGCT
GTGAGTGGTT TTCAGTACGG CAAGCTGACG GATTTTCTGA GTCATATATG GTTGCCTATC
TTTGTAATCG GCTGGGCTGC TACTGCATTG CAGTTACAAA CAGTGCGGGC GCTGGTGGTC
GATGAATCTA ATAAACTTTA TGTTGATGCG GCGCGTGCGC GTGGTGTTGA TGGTATGAGC
CTATGGGTGG GTTATCCCGT TCGCCATTCA ATTAGCCCGT TATTTAACAG TATCGGTTTT
GATTTTCAGC GGATATTTAA TGATCTGCCG ATCGTCGCAA TTGTTATTGG CATGACCGAT
TCAGCGGCAC TGTTAATTGA AGCCTTGGCC ATGACCAATG ATCAGGAGAT GGCAGCAGCG
ATTTTATTTC TGGTAGCCCT GGTGGTTATA TCGATGAATT TCATTACTGA TATTGTTCTG
GCAGCGGTCG ATCCGCGTGT CCGTAATAGT GTACTTGGGT AA
 
Protein sequence
MIADFFTSTW LLWVLLSVAG FLFWRSRSSK YFLYVFNRYL LALMTLLIVS GIVFSLMEVL 
PGDCAEKYIA YKSSQGEMIT QADIAAERSR MGLDRSLIVR WSSWITDLTL RGDLGFSCAK
RQSVNIALGD RFWMSFGFCI AGLLFAYLIA VPFGILSAYM INKPWLDKNP KYNKKQRWIN
SIGLSFNKVL DLKLRMISYL GLALPNFLLA LSIILLYVFA GEPVPTGLFS DQWSAEPWFA
VSGFQYGKLT DFLSHIWLPI FVIGWAATAL QLQTVRALVV DESNKLYVDA ARARGVDGMS
LWVGYPVRHS ISPLFNSIGF DFQRIFNDLP IVAIVIGMTD SAALLIEALA MTNDQEMAAA
ILFLVALVVI SMNFITDIVL AAVDPRVRNS VLG