Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tpet_1683 |
Symbol | |
ID | 5169999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga petrophila RKU-1 |
Kingdom | Bacteria |
Replicon accession | NC_009486 |
Strand | + |
Start bp | 1682714 |
End bp | 1683697 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640564209 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001245264 |
Protein GI | 148270804 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000273599 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGGCT ACATTCTACG GCGATTAGTC CAGATGCTGG TGACATTGTT TGTGATATCG GTGATATCGT TTGTGATCAT ACAGCTTCCA CCTGGGGACT ATCTGACATC GTACATAGCG TCACTGGCAG CGACGGGAGA GACAGTGGAT CAAGCGACGA TAGAGGCATT GAGGAAGCAA TATGGACTGG ATTTACCGAT ATACGTACAG TATTTCAAGT GGTTGTGGGG GATACTGCAC GGGGACTTTG GCTACTCGTT TTCGTGGAAC AGGCCGGTAT CGGAACTTTT GTGGGGAAGA CTTGGGCTTT CGGTTCTTGT GTCGACGGTT GCTGTGATCT TCAGCTGGGT GAGTGGCTTT TTGATAGGCA TGTACTCTGC GACACATCAG TATTCGATAG GGGACTATCT TGCGACATTT TTGGGCTACA TTGGGCTTGC CACACCGAAC TTTTTGCTGG CACTGGTACT TCTGTGGCTT GTTTACAGCA CGACAGGGGT GAACCTTGGA GGGCTGTTTT CACCGCAGTA CCTTGATGCA CCATGGAGTT TTGCAAAATT TGTGGACATG CTGAAGCACC TGTGGCTTCC GATGATCGTT GTGGGAACGG CGGGCATGGC AGGGCTCATC AGGACACTGA GGGCAAACCT TCTCGATGAA CTTCACAAGC CCTATGTGGA GGCAGCACTC TCCAAGGGGC TTCCAGAGAA CAAAGTGTTC TGGAAGTATC CTTTGAGGAT AGCGATGATA CCGTTCATCA GCACGGTGGG ATGGTCACTG CCGGGGATCT TTTCCGGTGA GACGATCACG GCGATAGTTC TGAACCTTCC GACCGTTGGG CCACTTCTTC TGGGGGCGCT TCAGAGTCAG GACATGTACC TTGCGGGGAG TTTGGTGATG TTTTTGAGCT TTTTCACGGT GATAGGGACA CTGATCTCAG ACATACTTCT TGCGTGGGTG GATCCGAGGA TCAGGTTCGA GTAG
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Protein sequence | MLGYILRRLV QMLVTLFVIS VISFVIIQLP PGDYLTSYIA SLAATGETVD QATIEALRKQ YGLDLPIYVQ YFKWLWGILH GDFGYSFSWN RPVSELLWGR LGLSVLVSTV AVIFSWVSGF LIGMYSATHQ YSIGDYLATF LGYIGLATPN FLLALVLLWL VYSTTGVNLG GLFSPQYLDA PWSFAKFVDM LKHLWLPMIV VGTAGMAGLI RTLRANLLDE LHKPYVEAAL SKGLPENKVF WKYPLRIAMI PFISTVGWSL PGIFSGETIT AIVLNLPTVG PLLLGALQSQ DMYLAGSLVM FLSFFTVIGT LISDILLAWV DPRIRFE
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