Gene Mjls_3402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMjls_3402 
Symbol 
ID4879114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. JLS 
KingdomBacteria 
Replicon accessionNC_009077 
Strand
Start bp3567470 
End bp3568438 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content69% 
IMG OID640140705 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001071671 
Protein GI126435980 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.414511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGT TGCTCACCCA CCCCGTCGTA CGCTTCCTCG CCCGGCGGAT CGCCTATTCG 
CTGGTGGTGC TGATCGGTGT GCTGGTCGTG GTGTTCGCAC TCGTGCAGTT GGTGCCCGGT
GACCCCGTGC GCATCGCGCT GGGAACCCGC TACACCCCGG AGGCGTACGA GGCGCTGCGG
TCGGCGAGCG GCCTGGACCG CCCGTTGATC GTGCAGTTCT TCAGTTATCT GGGCAATGCG
CTCACCGGTG ATCTCGGGGT GAGTTTCCGC AACGGCGACC CGGTCACCGC CACCCTGCTC
GACCGCCTGC CCGCGACGGT GTCCCTGGGG TTGGTGGGCA TCGTGTTCGC ACTGCTCATC
GCGGTGCCCG CGGGCATCTG GGCAGCGCTG CGCGAAGGCC GGGTCAGCGA TGCGATCGTG
CGGGTGAGCA GCCAGTTCGG GGTCTCGGTC CCGGACTTCT GGCTCGGCAT CCTGTTGATC
GCGCTGTTCT CGTCGACGCT GGGGTGGCTG CCGACGTCGG GGTACCGACC GCTGTTCGAC
GATCCGGCGG GCTGGCTGCG CCACATCGTC CTGCCGGGGC TGACCGTCGG ATTGGTGGCG
GCGGCGATCA TGACCCGCTA CATCCGGTCC GCGGTGCTCG AGGTCGCCTC GATGGGCTAC
GTGCGGACCG CCCGGTCGAA AGGCCTTGCG CCGCGGGTGG TCACGCTGCG CCACACGGTG
CGCAACGCGC TGATCCCGGT GCTCACCATC ACCGGTATCC AACTCGCCAC GATCCTGGGC
GGCGTCATCG TCGTCGAGGT GGTCTTCGCC TGGCCCGGCC TGGGCCGGCT CGTGTACAAC
GCCGTCGCCG CCCGCGACTA CCCCCTCATC CAGGGCGCGG TGCTGCTGAT GGCCGCCCTG
TTCTTGCTCA TCAACCTGAT CGTGGACGCG CTGTACGCGG TCGCCGACCC GAGGATCCGG
CTGTCATGA
 
Protein sequence
MTALLTHPVV RFLARRIAYS LVVLIGVLVV VFALVQLVPG DPVRIALGTR YTPEAYEALR 
SASGLDRPLI VQFFSYLGNA LTGDLGVSFR NGDPVTATLL DRLPATVSLG LVGIVFALLI
AVPAGIWAAL REGRVSDAIV RVSSQFGVSV PDFWLGILLI ALFSSTLGWL PTSGYRPLFD
DPAGWLRHIV LPGLTVGLVA AAIMTRYIRS AVLEVASMGY VRTARSKGLA PRVVTLRHTV
RNALIPVLTI TGIQLATILG GVIVVEVVFA WPGLGRLVYN AVAARDYPLI QGAVLLMAAL
FLLINLIVDA LYAVADPRIR LS