Gene Bcer98_0553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcer98_0553 
Symbol 
ID5345156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBacillus cytotoxicus NVH 391-98 
KingdomBacteria 
Replicon accessionNC_009674 
Strand- 
Start bp632383 
End bp633351 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content37% 
IMG OID640838146 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001373897 
Protein GI152974380 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGAAGT TTATACTGCG AAGATTCTTA ATTATGATTC CGCAGCTATT TATATTAAGT 
ATCCTCGTCT TCATGCTTGC GAAAGCAATG CCAGGAGATG CATTAACTGG TAGAGCTGCA 
AATAATCCAA AAGCAGACCC AAAAATTATT GAAGAACAAC GCGAAAAATT AGGATTAAAT 
GACCCTGTTA CAACCCAATA TGTACGCTGG ATTAAAAATG CCTTACAAGG TGATTTTGGT 
ATTTCTTACG CACATAAATT AAAAGTAACC GACTTAATTG GGGAACGCCT GGGGAATACA 
GTATTACTCG CTCTTGTCAT TCTTATTCTG ACTTACTTAA TTGCGATTCC ACTTGGCATT 
ATTAGCGGAC GTTGGAATGA TACATTAGGC GACCGACTCA TTACACTATA CAACTACTTA 
GGATTTGCAA CACCTTTATT TATATTTGCA TTAATTATGC TATTTCTTTT CGGATTTAAA 
TTCCCGATAT TTCCAACAGG AGGTAGTGTC GATCCGCAAA TTACGACCGG TACATTTGCT 
TACTATATGA GTAAGTTGAA TCACTTACTA TTGCCCGCTC TATCTGGAGC ATTAATTGCT 
ACAGTTGGTA CTGTACAATA TTTGAGAAGT GAAATTATTG ATACAAAACA TAAAGACTTT 
GTACGCACAG TACGAGCAAA AGGGGTTCCG GAATCAAAAG TGTATTCTAG ACATATTTTA 
CGAAACTCAT TCTTACCAAT TGCAGCATTT CTAGGTTATG AAATTACCGG ATTAGTTGGT 
GGAGCGATAT TTTTAGAAAA TATCTTTAGC TATCCAGGTA TCGGACAATT ATTTATGCAA 
TCCATTTCCC AACGTGACTT TAGTGTCATA ACAGCCCTCG TTTTATTTAC TGGATTCGCA 
ACGTTACTTG GAACTCTCCT TTCAGATATC ATTCTAAGCA TCGTTGACCC ACGTATTCGT 
ATTGATTAA
 
Protein sequence
MWKFILRRFL IMIPQLFILS ILVFMLAKAM PGDALTGRAA NNPKADPKII EEQREKLGLN 
DPVTTQYVRW IKNALQGDFG ISYAHKLKVT DLIGERLGNT VLLALVILIL TYLIAIPLGI 
ISGRWNDTLG DRLITLYNYL GFATPLFIFA LIMLFLFGFK FPIFPTGGSV DPQITTGTFA 
YYMSKLNHLL LPALSGALIA TVGTVQYLRS EIIDTKHKDF VRTVRAKGVP ESKVYSRHIL 
RNSFLPIAAF LGYEITGLVG GAIFLENIFS YPGIGQLFMQ SISQRDFSVI TALVLFTGFA 
TLLGTLLSDI ILSIVDPRIR ID