| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_6669 |
|---|
| Symbol | |
|---|
| ID | 8022579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012858 |
|---|
| Strand | - |
|---|
| Start bp | 99159 |
|---|
| End bp | 100100 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644833536 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_002984670 |
|---|
| Protein GI | 241666586 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000789572 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0157107 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACGCT ACATCCTCCA GCGCCTGTTC GGCATGATCG TCGTGATGTT TCTCGTCGTC
ACGATCGTCT TCGTCATCGT GCGCGTGACG CCGGGAGATC CGGCGGCCGT CATGCTCGGG
CCGGATGCGA CGCCGCAGGA TATTGCCGAC CTCAGGGCCC GGCTCGGCCT CGATCAGTCG
CTCGGCCTGC AATATGTCTA TTATATCGGC CAGATGCTGA GAGGTGATCT CGGCCAGTCG
ATCTTCCTCA ACATGCCTGT CACCTCGGCC TTGCTCGACC GGGCCGAGCC GACCTTCTTC
CTGACTTTGT TTTCGCTCGC AATCGCCAGC ATCATCGCCC TGCCGATCGG CATTTATGCC
GCTTATCGGC GCGGCTCCTT CATCGATCAG GCGGCAACGA CGCTCGCGAT GTTCGCCGCC
AGCATTCCGA GCTTTTGGCT CGGCCTGATC CTGATGCAGT TCTTCGCCGT CAGGCTCAAT
CTCTTCCCGG TCTCGGGTTA TGGCGGTCCG GGCTCGACCT TCTTCGAGCG CATGTATCAC
CTGACGCTGC CTGCCTTTGC GCTCGGCATC GTCTCCTCGG CGCTGATCCT GCGTTTCACC
CGCGCGTCGA TGCTCGATGT GCTCGGCGAC GATTATATCC GTACCGCCCG CGCCAAGGGA
TTGATCGAGC GACGGGTGAT CCTCAAGCAC GCGCTGAAGA ATGCGCTGAT CCCGATCCTG
ACGGTGATCG GCCTGACGGC AGCGGTGCTG ATTTCAGGCG CCGTCGTCAC CGAGACCGTC
TTCGGCCTGC CTGGTGTCGG CAATCTCGTC GTCTCCGCGG TTCTGCGCCG CGACTATCCC
GTCATCCAGG GGGCTCTGCT CGTCATCGCC GCTCTCTACG TGCTGATCAA TTTTGCGATC
GACATGCTCT ATCTGTTGAT CGATCCGAGG GTGCGCTACT GA
|
|---|
| Protein sequence | MIRYILQRLF GMIVVMFLVV TIVFVIVRVT PGDPAAVMLG PDATPQDIAD LRARLGLDQS
LGLQYVYYIG QMLRGDLGQS IFLNMPVTSA LLDRAEPTFF LTLFSLAIAS IIALPIGIYA
AYRRGSFIDQ AATTLAMFAA SIPSFWLGLI LMQFFAVRLN LFPVSGYGGP GSTFFERMYH
LTLPAFALGI VSSALILRFT RASMLDVLGD DYIRTARAKG LIERRVILKH ALKNALIPIL
TVIGLTAAVL ISGAVVTETV FGLPGVGNLV VSAVLRRDYP VIQGALLVIA ALYVLINFAI
DMLYLLIDPR VRY
|
|---|
| |