| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4141 |
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| Symbol | |
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| ID | 5319137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | + |
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| Start bp | 612904 |
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| End bp | 613917 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640775946 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001312879 |
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| Protein GI | 150376283 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.633745 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAGAT TTCTGCTCGT CCGCATCGCC TCTGCCATTC CGGTGCTCCT CGTCTTGAGC
GTGGTGACCT TCGGCATCAT CCAGGCACCG CCCGGAGACT ATAGCGACTA CATCCGCTCG
CAACTCATCA ATCAGGGAGG CGCTTCTTTC GAGGAAGCCG ACGCCCAGGC GCAAGCGTAC
CGCAAGGAGC ACGGTCTCGA TAGGCCGCTG CCTATCCAGT ACGTCGACTG GATAACGGGC
ATCGTGACGC GCGGGGATTT CGGCCACAGC CTCTATTACA ACAAGCCGGT CGCCGACGTC
GTCGGCGAGC GTCTGCCGCG CACGCTGGCA TTGGCGCTGG TCTGCCACAT TCTTGCATCC
GTGATCGGCA TCGCCTTCGG TATCATCGCG GCGACGCGGC AATATTCCTG GATCGACAGC
CTGCTTTCGA CCATATCGTT CCTCGGGATG ACGGTGCCGC GCTTCCTCAT GGCGCTGATC
ATCGTCTATA TTCTCGTCTT CCATTTCAAT GTGAGCGAGA TCAACAGCTT CCATTCGGCG
CGCTACGGCG GGGCGCCCTG GTCCTGGGAG AAATTCGTCG ACCTGGTGAA GCATGTCTGG
CCGGTCGTCG CGATCGCCAC CTTCGGCGGG CTCGCTTACA ACATGCGGGT GATGCGTGGC
AATCTCCTCG ATACGCTGAA TGCGCAGTAT GTCGAGACGG CGCGGGCCAA GGGACTGAGC
GAGGGCGCGG TCGTCATGCG CCATGCGGTG CCGAATGCCC TTCATCCGCT GATCATGTAT
CAGGGCGTCG TGCTTCCTTA CATGCTGACC GGGGAGATCG AGACTGCCAT CATTTTCGCT
TTGCCGACCG TCGGTCCGGC GATCGTGGGC TCCATGTGGG TAGGCGACGT CTATGTGACG
GCCACCTTCA TGCTGGTCCT TTCCGCAACG CTGATCGTCG GCAACATCAT AGCCGACATG
ATGCTCGCCG CGCTCGATCC GCGCGTACGC ATGGGTGGGG GGGCATACGC ATGA
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| Protein sequence | MFRFLLVRIA SAIPVLLVLS VVTFGIIQAP PGDYSDYIRS QLINQGGASF EEADAQAQAY
RKEHGLDRPL PIQYVDWITG IVTRGDFGHS LYYNKPVADV VGERLPRTLA LALVCHILAS
VIGIAFGIIA ATRQYSWIDS LLSTISFLGM TVPRFLMALI IVYILVFHFN VSEINSFHSA
RYGGAPWSWE KFVDLVKHVW PVVAIATFGG LAYNMRVMRG NLLDTLNAQY VETARAKGLS
EGAVVMRHAV PNALHPLIMY QGVVLPYMLT GEIETAIIFA LPTVGPAIVG SMWVGDVYVT
ATFMLVLSAT LIVGNIIADM MLAALDPRVR MGGGAYA
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