| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0509 |
|---|
| Symbol | |
|---|
| ID | 6091924 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermotoga sp. RQ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010483 |
|---|
| Strand | - |
|---|
| Start bp | 509112 |
|---|
| End bp | 510095 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642487696 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001738548 |
|---|
| Protein GI | 170288310 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0910485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTGGGCT ACATTCTACG TCGGTTGGTA CAGATGCTGG TGACATTGTT TGTGATATCG
GTGATATCGT TTGTGATCAT ACAGCTTCCA CCTGGGGACT ATCTGACATC GTACATAGCG
TCACTGGCAG CGACGGGAGA GACAGTGGAT CAAGCGACGA TAGAGGCATT GAGGAAGCAA
TATGGACTGG ATTTACCGAT ATACGTACAG TATTTCAAGT GGCTGTGGGG GATACTGCAC
GGGGACTTTG GCTACTCGTT TTCGTGGAAC AGGCCGGTAT CGGAACTTTT GTGGGGAAGA
CTTGGGCTTT CGGTTCTTGT GTCGACGGTT GCTGTGATCT TCAGCTGGGT GAGTGGCTTT
TTGATAGGCA TGTACTCTGC GACACATCAG TATTCGATAG GGGACTATCT TGCGACATTT
TTGGGCTACA TTGGGCTTGC CACACCGAAC TTTTTGCTGG CACTGGTACT TCTGTGGCTT
GTTTACAGCA CGACAGGGGT GAACCTTGGA GGGCTGTTTT CACCGCAGTA CCTTGATGCA
CCGTGGAGTT TTGCAAAGTT TGTGGACATG CTGAAGCACC TGTGGCTTCC GATGATCGTT
GTGGGAACGG CGGGCATGGC AGGGCTCATC AGGACGCTGA GGGCGAACCT TCTCGATGAG
CTTCACAAGC CCTATGTGGA GGCAGCACTC TCCAAGGGGC TTCCAGAGAA CAAAGTGTTC
TGGAAGTATC CTTTGAGGAT AGCGATGATA CCGTTCATCA GCACGGTGGG ATGGTCACTG
CCGGGGATCT TTTCCGGTGA GACGATCACG GCGATAGTTC TGAACCTTCC GACCGTTGGG
CCACTTCTTC TGGGGGCGCT TCAGAGTCAG GACATGTACC TTGCGGGGAG TTTGGTGATG
TTTTTGAGCT TTTTCACGGT GATAGGGACA CTGATCTCAG ACATACTTCT TGCGTGGGTG
GATCCGAGGA TCAGGTTCGA GTAG
|
|---|
| Protein sequence | MLGYILRRLV QMLVTLFVIS VISFVIIQLP PGDYLTSYIA SLAATGETVD QATIEALRKQ
YGLDLPIYVQ YFKWLWGILH GDFGYSFSWN RPVSELLWGR LGLSVLVSTV AVIFSWVSGF
LIGMYSATHQ YSIGDYLATF LGYIGLATPN FLLALVLLWL VYSTTGVNLG GLFSPQYLDA
PWSFAKFVDM LKHLWLPMIV VGTAGMAGLI RTLRANLLDE LHKPYVEAAL SKGLPENKVF
WKYPLRIAMI PFISTVGWSL PGIFSGETIT AIVLNLPTVG PLLLGALQSQ DMYLAGSLVM
FLSFFTVIGT LISDILLAWV DPRIRFE
|
|---|
| |