Gene Sked_14290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_14290 
Symbol 
ID8633065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp1607458 
End bp1608447 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content68% 
IMG OID 
ProductABC-type dipeptide/oligopeptide/nickel transport system, permease component 
Protein accessionYP_003314199 
Protein GI269794744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGCT ACGTCCTCCG GCGCGTGCTC ATCGCCGTCC CGGTGCTGTT CCTCATCTCG 
ATCGCCGCCT TCGCGATCAT CCAGCTGCCG CCCGGCGACT ACCTCACCAC CTACGTGGCC
GGGCTGCAGG CCTCGGGCCA GGCCGTCAAC GCCGCCCAGG TGGCACAGCT CGCCGAGCAG
TACGGGCTCA ACCAGCCGAT CTGGGTCCAG TACCTCAAGT GGATCGGCAA CGTCCTCCAG
GGCGACTTCG GCACGTCCTT CGAGTGGAAC CAGCCCGTCT CGACGCTGCT CGCCGAACGT
CTCCCGCTGA CCATCGTCCT GGCGGTCACC ACGCTGCTCT TCACGTGGCT GCTCGCCTTC
CCGGCCGGAA TCTACTCGGC CCTGCGCCAG TACTCCTGGG GCGACTACAG CATCACGGTC
CTCGCGTTCC TCGGCATCGC CGTCCCGAAC TTCCTCATCG CGCTCGTCCT CGCGTGGATC
AGCTCGTCGG TGTTCGGGCA ACCCATCGGC GGGCTGTTCT CCGCGGAGTA CGTCGACGCG
TCGTGGAACC TCGGCAAGGT GCTCGACCTC CTCGCGCACA TCTGGGTGCC CATCGTGGTG
CTCGGTGCTG CCGGGACGGC CGGGCTGATG CGGATCCTGC GCGCCAACCT GCTCGACGAG
CTGCGCCGCC CGTACGTCAC CGCAGCCCGT GCGCGAGGGA TCCCCGAGCG TCGTCTCATC
GTCCGCTACC CGCTCCGCGT GGCGCTCAAC CCGTTCATCT CGACGATCGG GTGGGTGCTG
CCCGCGCTCA TCTCGGGCGA GGTGATCGTG GCCCAGGTGC TGGCGCTGCC CACCACCGGC
CCGCTCCTGG TCAGCGCCCT CACCAGCCAG GACATGTTCC TCGCCGGCTC GATCATCCTC
ATCATCAGCA CGCTCACCGT CATCGGCTCG CTCGTCTCCG ACGTGGCCCT GGCGCTGCTG
GACCCCCGCA TCCGACTCAG CTACCAGTGA
 
Protein sequence
MIRYVLRRVL IAVPVLFLIS IAAFAIIQLP PGDYLTTYVA GLQASGQAVN AAQVAQLAEQ 
YGLNQPIWVQ YLKWIGNVLQ GDFGTSFEWN QPVSTLLAER LPLTIVLAVT TLLFTWLLAF
PAGIYSALRQ YSWGDYSITV LAFLGIAVPN FLIALVLAWI SSSVFGQPIG GLFSAEYVDA
SWNLGKVLDL LAHIWVPIVV LGAAGTAGLM RILRANLLDE LRRPYVTAAR ARGIPERRLI
VRYPLRVALN PFISTIGWVL PALISGEVIV AQVLALPTTG PLLVSALTSQ DMFLAGSIIL
IISTLTVIGS LVSDVALALL DPRIRLSYQ