Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sked_14290 |
Symbol | |
ID | 8633065 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sanguibacter keddieii DSM 10542 |
Kingdom | Bacteria |
Replicon accession | NC_013521 |
Strand | - |
Start bp | 1607458 |
End bp | 1608447 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | ABC-type dipeptide/oligopeptide/nickel transport system, permease component |
Protein accession | YP_003314199 |
Protein GI | 269794744 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCGCT ACGTCCTCCG GCGCGTGCTC ATCGCCGTCC CGGTGCTGTT CCTCATCTCG ATCGCCGCCT TCGCGATCAT CCAGCTGCCG CCCGGCGACT ACCTCACCAC CTACGTGGCC GGGCTGCAGG CCTCGGGCCA GGCCGTCAAC GCCGCCCAGG TGGCACAGCT CGCCGAGCAG TACGGGCTCA ACCAGCCGAT CTGGGTCCAG TACCTCAAGT GGATCGGCAA CGTCCTCCAG GGCGACTTCG GCACGTCCTT CGAGTGGAAC CAGCCCGTCT CGACGCTGCT CGCCGAACGT CTCCCGCTGA CCATCGTCCT GGCGGTCACC ACGCTGCTCT TCACGTGGCT GCTCGCCTTC CCGGCCGGAA TCTACTCGGC CCTGCGCCAG TACTCCTGGG GCGACTACAG CATCACGGTC CTCGCGTTCC TCGGCATCGC CGTCCCGAAC TTCCTCATCG CGCTCGTCCT CGCGTGGATC AGCTCGTCGG TGTTCGGGCA ACCCATCGGC GGGCTGTTCT CCGCGGAGTA CGTCGACGCG TCGTGGAACC TCGGCAAGGT GCTCGACCTC CTCGCGCACA TCTGGGTGCC CATCGTGGTG CTCGGTGCTG CCGGGACGGC CGGGCTGATG CGGATCCTGC GCGCCAACCT GCTCGACGAG CTGCGCCGCC CGTACGTCAC CGCAGCCCGT GCGCGAGGGA TCCCCGAGCG TCGTCTCATC GTCCGCTACC CGCTCCGCGT GGCGCTCAAC CCGTTCATCT CGACGATCGG GTGGGTGCTG CCCGCGCTCA TCTCGGGCGA GGTGATCGTG GCCCAGGTGC TGGCGCTGCC CACCACCGGC CCGCTCCTGG TCAGCGCCCT CACCAGCCAG GACATGTTCC TCGCCGGCTC GATCATCCTC ATCATCAGCA CGCTCACCGT CATCGGCTCG CTCGTCTCCG ACGTGGCCCT GGCGCTGCTG GACCCCCGCA TCCGACTCAG CTACCAGTGA
|
Protein sequence | MIRYVLRRVL IAVPVLFLIS IAAFAIIQLP PGDYLTTYVA GLQASGQAVN AAQVAQLAEQ YGLNQPIWVQ YLKWIGNVLQ GDFGTSFEWN QPVSTLLAER LPLTIVLAVT TLLFTWLLAF PAGIYSALRQ YSWGDYSITV LAFLGIAVPN FLIALVLAWI SSSVFGQPIG GLFSAEYVDA SWNLGKVLDL LAHIWVPIVV LGAAGTAGLM RILRANLLDE LRRPYVTAAR ARGIPERRLI VRYPLRVALN PFISTIGWVL PALISGEVIV AQVLALPTTG PLLVSALTSQ DMFLAGSIIL IISTLTVIGS LVSDVALALL DPRIRLSYQ
|
| |