More than 300 homologs were found in PanDaTox collection
for query gene Nmar_0422 on replicon NC_010085
Organism: Nitrosopumilus maritimus SCM1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010085  Nmar_0422  3-isopropylmalate dehydratase large subunit  100 
 
 
471 aa  982    Nitrosopumilus maritimus SCM1  Archaea  n/a    normal  0.0695199 
 
 
-
 
NC_013411  GYMC61_0861  isopropylmalate isomerase large subunit  62.69 
 
 
471 aa  605  9.999999999999999e-173  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013412  GYMC61_3567  isopropylmalate isomerase large subunit  62.95 
 
 
477 aa  607  9.999999999999999e-173  Geobacillus sp. Y412MC61  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2591  isopropylmalate isomerase large subunit  63.68 
 
 
471 aa  600  1e-170  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00933091  n/a   
 
 
-
 
NC_013525  Tter_0194  3-isopropylmalate dehydratase, large subunit  62.98 
 
 
469 aa  595  1e-169  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013159  Svir_09060  3-isopropylmalate dehydratase, large subunit  62.21 
 
 
471 aa  596  1e-169  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.918212  normal 
 
 
-
 
NC_008009  Acid345_2916  isopropylmalate isomerase large subunit  63.54 
 
 
470 aa  595  1e-169  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1423  3-isopropylmalate dehydratase, large subunit  62.58 
 
 
473 aa  597  1e-169  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0278  isopropylmalate isomerase large subunit  62.77 
 
 
469 aa  596  1e-169  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0626  isopropylmalate isomerase large subunit  62.77 
 
 
465 aa  592  1e-168  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_2256  isopropylmalate isomerase large subunit  59.45 
 
 
484 aa  586  1e-166  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000000783708 
 
 
-
 
NC_013510  Tcur_3463  3-isopropylmalate dehydratase, large subunit  63.27 
 
 
465 aa  582  1.0000000000000001e-165  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0762821  n/a   
 
 
-
 
NC_008541  Arth_2519  isopropylmalate isomerase large subunit  59.66 
 
 
484 aa  584  1.0000000000000001e-165  Arthrobacter sp. FB24  Bacteria  normal  0.252815  n/a   
 
 
-
 
NC_008578  Acel_1591  isopropylmalate isomerase large subunit  61.91 
 
 
473 aa  584  1.0000000000000001e-165  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.777227 
 
 
-
 
CP001509  ECD_00074  isopropylmalate isomerase large subunit  60.43 
 
 
466 aa  580  1e-164  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3526  3-isopropylmalate dehydratase, large subunit  60.43 
 
 
466 aa  580  1e-164  Escherichia coli DH1  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_00073  hypothetical protein  60.43 
 
 
466 aa  580  1e-164  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0077  isopropylmalate isomerase large subunit  60.21 
 
 
466 aa  580  1e-164  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2357  3-isopropylmalate dehydratase, large subunit  59.83 
 
 
517 aa  580  1e-164  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3585  isopropylmalate isomerase large subunit  60.21 
 
 
466 aa  580  1e-164  Escherichia coli ATCC 8739  Bacteria  normal  hitchhiker  0.000478946 
 
 
-
 
NC_010498  EcSMS35_0077  isopropylmalate isomerase large subunit  60.43 
 
 
466 aa  580  1e-164  Escherichia coli SMS-3-5  Bacteria  normal  normal  0.387894 
 
 
-
 
NC_013521  Sked_11100  3-isopropylmalate dehydratase, large subunit  60.69 
 
 
479 aa  579  1e-164  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E0066  isopropylmalate isomerase large subunit  60.43 
 
 
466 aa  580  1e-164  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3609  isopropylmalate isomerase large subunit  60.72 
 
 
466 aa  576  1.0000000000000001e-163  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_0079  isopropylmalate isomerase large subunit  60.21 
 
 
466 aa  576  1.0000000000000001e-163  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_3797  isopropylmalate isomerase large subunit  60.51 
 
 
466 aa  577  1.0000000000000001e-163  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B0127  isopropylmalate isomerase large subunit  60.64 
 
 
466 aa  577  1.0000000000000001e-163  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_2316  3-isopropylmalate dehydratase, large subunit  59.87 
 
 
487 aa  575  1.0000000000000001e-163  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000114053 
 
 
-
 
NC_009783  VIBHAR_00815  isopropylmalate isomerase large subunit  59.66 
 
 
466 aa  575  1.0000000000000001e-163  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009832  Spro_0743  isopropylmalate isomerase large subunit  61.91 
 
 
466 aa  575  1.0000000000000001e-163  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011094  SeSA_A0127  isopropylmalate isomerase large subunit  60.64 
 
 
466 aa  577  1.0000000000000001e-163  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.03719 
 
 
-
 
NC_011083  SeHA_C0122  isopropylmalate isomerase large subunit  60.43 
 
 
466 aa  575  1.0000000000000001e-163  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.924094  normal  0.160243 
 
 
-
 
NC_011080  SNSL254_A0123  isopropylmalate isomerase large subunit  60.43 
 
 
466 aa  575  1.0000000000000001e-163  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.610682  normal  0.713431 
 
 
-
 
NC_011205  SeD_A0120  isopropylmalate isomerase large subunit  60.64 
 
 
466 aa  577  1.0000000000000001e-163  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1478  3-isopropylmalate dehydratase, large subunit  60.38 
 
 
486 aa  578  1.0000000000000001e-163  Nakamurella multipartita DSM 44233  Bacteria  normal  0.333411  normal  0.827202 
 
 
-
 
NC_012669  Bcav_1573  3-isopropylmalate dehydratase, large subunit  60.47 
 
 
493 aa  576  1.0000000000000001e-163  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.488131  normal 
 
 
-
 
NC_013456  VEA_001658  3-isopropylmalate dehydratase large subunit  60.08 
 
 
466 aa  577  1.0000000000000001e-163  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_0075  isopropylmalate isomerase large subunit  60.21 
 
 
466 aa  576  1.0000000000000001e-163  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8049  3-isopropylmalate dehydratase, large subunit  60.39 
 
 
468 aa  572  1.0000000000000001e-162  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.200463  normal 
 
 
-
 
NC_009436  Ent638_0620  isopropylmalate isomerase large subunit  60.21 
 
 
466 aa  573  1.0000000000000001e-162  Enterobacter sp. 638  Bacteria  normal  normal  0.135441 
 
 
-
 
NC_009484  Acry_2149  isopropylmalate isomerase large subunit  60.21 
 
 
466 aa  572  1.0000000000000001e-162  Acidiphilium cryptum JF-5  Bacteria  normal  0.754808  n/a   
 
 
-
 
NC_011901  Tgr7_1245  isopropylmalate isomerase large subunit  62.16 
 
 
470 aa  572  1.0000000000000001e-162  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.923179  n/a   
 
 
-
 
NC_012912  Dd1591_0592  3-isopropylmalate dehydratase, large subunit  60.3 
 
 
466 aa  572  1.0000000000000001e-162  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_2135  isopropylmalate isomerase large subunit  59.78 
 
 
481 aa  572  1.0000000000000001e-162  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_3407  isopropylmalate isomerase large subunit  60.3 
 
 
476 aa  568  1e-161  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012803  Mlut_08740  3-isopropylmalate dehydratase, large subunit  59.1 
 
 
484 aa  570  1e-161  Micrococcus luteus NCTC 2665  Bacteria  decreased coverage  0.000460564  n/a   
 
 
-
 
NC_013739  Cwoe_3550  3-isopropylmalate dehydratase, large subunit  60.85 
 
 
456 aa  571  1e-161  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_3537  isopropylmalate isomerase large subunit  60.3 
 
 
476 aa  568  1e-161  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_2802  3-isopropylmalate dehydratase large subunit  61.42 
 
 
462 aa  569  1e-161  Thermobispora bispora DSM 43833  Bacteria  normal  0.0861644  normal  0.228539 
 
 
-
 
NC_010159  YpAngola_A2938  isopropylmalate isomerase large subunit  60.3 
 
 
476 aa  568  1e-161  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_4227  isopropylmalate isomerase large subunit  59.78 
 
 
481 aa  570  1e-161  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.888543 
 
 
-
 
NC_013757  Gobs_4053  3-isopropylmalate dehydratase, large subunit  59.48 
 
 
474 aa  567  1e-160  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_1113  isopropylmalate isomerase large subunit  60.4 
 
 
465 aa  567  1e-160  Frankia sp. EAN1pec  Bacteria  normal  0.681996  normal  0.828695 
 
 
-
 
NC_007643  Rru_A1189  isopropylmalate isomerase large subunit  58.12 
 
 
472 aa  565  1e-160  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.672672  n/a   
 
 
-
 
NC_013441  Gbro_3215  3-isopropylmalate dehydratase, large subunit  59.53 
 
 
477 aa  567  1e-160  Gordonia bronchialis DSM 43247  Bacteria  normal  0.056695  n/a   
 
 
-
 
NC_013947  Snas_4999  3-isopropylmalate dehydratase large subunit  59 
 
 
470 aa  567  1e-160  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.653294  normal  0.386887 
 
 
-
 
NC_014210  Ndas_0185  3-isopropylmalate dehydratase, large subunit  59.52 
 
 
468 aa  567  1e-160  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.08009  normal 
 
 
-
 
NC_009379  Pnuc_0764  isopropylmalate isomerase large subunit  60.68 
 
 
469 aa  567  1e-160  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0630  3-isopropylmalate dehydratase, large subunit  60.08 
 
 
466 aa  567  1e-160  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8018  3-isopropylmalate dehydratase, large subunit  58.84 
 
 
459 aa  561  1.0000000000000001e-159  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_1149  isopropylmalate isomerase large subunit  58.99 
 
 
481 aa  561  1.0000000000000001e-159  Salinispora arenicola CNS-205  Bacteria  normal  unclonable  0.0000000597548 
 
 
-
 
NC_013172  Bfae_18560  3-isopropylmalate dehydratase, large subunit  59.83 
 
 
479 aa  563  1.0000000000000001e-159  Brachybacterium faecium DSM 4810  Bacteria  normal  0.242112  n/a   
 
 
-
 
NC_009077  Mjls_1901  isopropylmalate isomerase large subunit  58.71 
 
 
481 aa  564  1.0000000000000001e-159  Mycobacterium sp. JLS  Bacteria  normal  normal  0.918864 
 
 
-
 
NC_011365  Gdia_3280  isopropylmalate isomerase large subunit  59.19 
 
 
467 aa  564  1.0000000000000001e-159  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.215534  normal 
 
 
-
 
NC_007947  Mfla_1705  isopropylmalate isomerase large subunit  60.34 
 
 
468 aa  561  1.0000000000000001e-159  Methylobacillus flagellatus KT  Bacteria  normal  0.0785429  hitchhiker  0.00273209 
 
 
-
 
NC_008146  Mmcs_1921  isopropylmalate isomerase large subunit  58.71 
 
 
481 aa  564  1.0000000000000001e-159  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4441  isopropylmalate isomerase large subunit  58.95 
 
 
471 aa  561  1.0000000000000001e-159  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2225  3-isopropylmalate dehydratase, large subunit  61.91 
 
 
471 aa  563  1.0000000000000001e-159  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.918253  n/a   
 
 
-
 
NC_009565  TBFG_13003  isopropylmalate isomerase large subunit  59.65 
 
 
473 aa  564  1.0000000000000001e-159  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_1967  isopropylmalate isomerase large subunit  58.71 
 
 
481 aa  564  1.0000000000000001e-159  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
BN001301  ANIA_05886  alpha isopropylmalate isomerase (Eurofung)  59.45 
 
 
772 aa  559  1e-158  Aspergillus nidulans FGSC A4  Eukaryota  decreased coverage  0.00198619  normal  0.994666 
 
 
-
 
NC_002976  SERP1671  isopropylmalate isomerase large subunit  59.19 
 
 
456 aa  560  1e-158  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4210  isopropylmalate isomerase large subunit  58.33 
 
 
471 aa  558  1e-158  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_0158  isopropylmalate isomerase large subunit  60.34 
 
 
472 aa  558  1e-158  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_004310  BR1906  isopropylmalate isomerase large subunit  61.67 
 
 
469 aa  559  1e-158  Brucella suis 1330  Bacteria  normal  0.276241  n/a   
 
 
-
 
NC_009997  Sbal195_0399  isopropylmalate isomerase large subunit  59.31 
 
 
468 aa  559  1e-158  Shewanella baltica OS195  Bacteria  normal  hitchhiker  0.000573464 
 
 
-
 
NC_009485  BBta_0363  isopropylmalate isomerase large subunit  62.15 
 
 
468 aa  559  1e-158  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.271446  normal  0.532793 
 
 
-
 
NC_009505  BOV_1834  isopropylmalate isomerase large subunit  61.67 
 
 
469 aa  559  1e-158  Brucella ovis ATCC 25840  Bacteria  normal  0.538456  n/a   
 
 
-
 
NC_007404  Tbd_1922  isopropylmalate isomerase large subunit  59.79 
 
 
467 aa  560  1e-158  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0473  isopropylmalate isomerase large subunit  59.06 
 
 
474 aa  559  1e-158  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0413  isopropylmalate isomerase large subunit  59.31 
 
 
468 aa  558  1e-158  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.000000000169798 
 
 
-
 
NC_010506  Swoo_4548  isopropylmalate isomerase large subunit  59.28 
 
 
466 aa  559  1e-158  Shewanella woodyi ATCC 51908  Bacteria  normal  0.182173  normal  0.0136159 
 
 
-
 
NC_009665  Shew185_0387  isopropylmalate isomerase large subunit  59.31 
 
 
468 aa  559  1e-158  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3826  isopropylmalate isomerase large subunit  59.06 
 
 
466 aa  560  1e-158  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_2848  3-isopropylmalate dehydratase, large subunit  58.71 
 
 
481 aa  558  1e-158  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1358  3-isopropylmalate dehydratase, large subunit  59.66 
 
 
477 aa  561  1e-158  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.849318 
 
 
-
 
NC_009380  Strop_1258  isopropylmalate isomerase large subunit  58.35 
 
 
481 aa  559  1e-158  Salinispora tropica CNB-440  Bacteria  normal  0.55744  normal  0.382246 
 
 
-
 
NC_010531  Pnec_1057  isopropylmalate isomerase large subunit  59.83 
 
 
469 aa  560  1e-158  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.960077  normal  0.219462 
 
 
-
 
NC_008321  Shewmr4_3586  isopropylmalate isomerase large subunit  59.74 
 
 
474 aa  561  1e-158  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008789  Hhal_1812  isopropylmalate isomerase large subunit  59.7 
 
 
466 aa  559  1e-158  Halorhodospira halophila SL1  Bacteria  normal  0.364535  n/a   
 
 
-
 
NC_009092  Shew_3470  isopropylmalate isomerase large subunit  59.06 
 
 
466 aa  559  1e-158  Shewanella loihica PV-4  Bacteria  normal  0.510231  normal  0.406012 
 
 
-
 
NC_008577  Shewana3_3759  isopropylmalate isomerase large subunit  59.53 
 
 
474 aa  558  1e-158  Shewanella sp. ANA-3  Bacteria  normal  normal  0.134544 
 
 
-
 
NC_008699  Noca_3298  3-isopropylmalate dehydratase, large subunit  59.31 
 
 
471 aa  558  1e-158  Nocardioides sp. JS614  Bacteria  normal  0.405916  n/a   
 
 
-
 
NC_009831  Ssed_0395  isopropylmalate isomerase large subunit  59.06 
 
 
466 aa  560  1e-158  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.0000243407 
 
 
-
 
NC_002977  MCA2065  isopropylmalate isomerase large subunit  61.46 
 
 
470 aa  555  1e-157  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4234  isopropylmalate isomerase large subunit  59.83 
 
 
474 aa  557  1e-157  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_0388  isopropylmalate isomerase large subunit  59.1 
 
 
468 aa  556  1e-157  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_3621  isopropylmalate isomerase large subunit  59.96 
 
 
465 aa  555  1e-157  Frankia sp. CcI3  Bacteria  normal  normal  0.766514 
 
 
-
 
NC_007952  Bxe_B2889  isopropylmalate isomerase large subunit  59.83 
 
 
469 aa  556  1e-157  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_6006  3-isopropylmalate dehydratase, large subunit  58.61 
 
 
472 aa  557  1e-157  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0519027  n/a   
 
 
-
 
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