| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_3797 |
|---|
| Symbol | |
|---|
| ID | 8532223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 4193343 |
|---|
| End bp | 4194743 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | isopropylmalate isomerase large subunit |
|---|
| Protein accession | YP_003261139 |
|---|
| Protein GI | 261823033 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAAGA CGTTATATCA AAAATTGTAC GACGCGCACA TCGTGCATGA AGCGCCGAAC
GAAACACCGC TGCTGTATAT CGACAGGCAT CTGGTGCATG AAGTGACTTC CCCACAGGCA
TTCGACGGCC TGCGTGCGAT GGGCCGCAAG GTTCGTCAAC CAGGGAAAAC CTTCGCGACC
ATGGACCACA ACGTCTCCAC GCAGACCAAA GACATCAACG CCAGCGGTGA GATGGCCCGC
ATTCAGATGC AGGAGTTAAT CAAGAACTGT GCGGAATTCG GCGTTCAGTT GTATGACCTT
AACCACCCGA ATCAGGGCAT CGTTCACGTT ATCGGCCCAG AACAAGGGAT GACGCTGCCG
GGCATGACCA TCGTCTGCGG TGACTCACAC ACCGCAACGC ACGGCGCGTT TGGTTCACTG
GCCTTCGGCA TCGGTACATC GGAAGTCGAA CATGTGCTGG CGACGCAAAC CCTGAAACAG
GGTCGTGCCA AAACCATGAA GATTGAAGTC ACGGGTGATG CGGCACACGG CATCACCGCA
AAAGACATCG TGCTGGCGAT CATCGGTAAA ACAGGTAGCG CGGGCGGCAC CGGCCATGTC
GTTGAATTTT GTGGCAAAGC CATTCGTGCG CTGAGCATGG AAGGCCGTAT GACACTGTGC
AACATGGCTA TTGAGATGGG TGCGAAGGCG GGTCTGGTTG CACCGGATGA AACCACCTTC
AACTACCTGA AAGGCCGCCA GTTTGCTCCG AAAGACGCCA ACTGGGACGC CGCCGTTGCC
TACTGGAGCA CGCTGGAATC CGATGATGAC GCGCAGTTTG ACACTATCGT CACGCTGGAC
GCCGCGCAGA TTGCACCGCA GGTCACCTGG GGCACCAACC CCGGTCAGGT TATCGCCGTC
AATCAGGAAA TCCCTAACCC TGATTCTTTC AGCGATCCGG TAGAGCGCGC CTCTGCCGCC
AAAGCACTGG CGTATATGGA TCTGCAACCC GGCATTAAAC TGACTGACGT GAAGATCGAT
AAAGTCTTCA TTGGTTCCTG TACCAACTCG CGCATCGAAG ATTTGCGCGC AGCGGCAGAG
ATTGCCAAAG GGCGTAAAGT CGCCGCTGGC GTTCAGGCCA TCGTCGTACC CGGCTCCGGC
CCGGTAAAAA CCATGGCAGA GCTGGAAGGG CTGGATAAAG TGTTCATCGA AGCGGGTTTT
GAGTGGCGCT TACCGGGCTG CTCCATGTGC CTGGCGATGA ACAATGACCG CCTGAACCCT
GGCGAACGTT GTGCATCAAC CAGTAACCGT AACTTTGAAG GCCGTCAGGG GCGCGCTGGC
CGCACCCATT TGGTCAGCCC GGCAATGGCT GCGGCTGCGG CGGTGACGGG TCGCTTTGCC
GACGTCCGCG AGTTGAATTA A
|
|---|
| Protein sequence | MGKTLYQKLY DAHIVHEAPN ETPLLYIDRH LVHEVTSPQA FDGLRAMGRK VRQPGKTFAT
MDHNVSTQTK DINASGEMAR IQMQELIKNC AEFGVQLYDL NHPNQGIVHV IGPEQGMTLP
GMTIVCGDSH TATHGAFGSL AFGIGTSEVE HVLATQTLKQ GRAKTMKIEV TGDAAHGITA
KDIVLAIIGK TGSAGGTGHV VEFCGKAIRA LSMEGRMTLC NMAIEMGAKA GLVAPDETTF
NYLKGRQFAP KDANWDAAVA YWSTLESDDD AQFDTIVTLD AAQIAPQVTW GTNPGQVIAV
NQEIPNPDSF SDPVERASAA KALAYMDLQP GIKLTDVKID KVFIGSCTNS RIEDLRAAAE
IAKGRKVAAG VQAIVVPGSG PVKTMAELEG LDKVFIEAGF EWRLPGCSMC LAMNNDRLNP
GERCASTSNR NFEGRQGRAG RTHLVSPAMA AAAAVTGRFA DVRELN
|
|---|
| |