Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_6006 |
Symbol | |
ID | 8330213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 7049998 |
End bp | 7051416 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644946436 |
Product | 3-isopropylmalate dehydratase, large subunit |
Protein accession | YP_003103659 |
Protein GI | 256379999 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0519027 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGCA CGCTCGCGGA GAAGGTGTGG GAGGCGCACG TCGTGCGCCA CGGCAGCGGC GCTGAGCCCG ACCTGCTCTA CATCGACCTC CACCTGCTGC ACGAGGTGAC CAGTCCGCAG GCGTTCGACG GGCTTCGGCT GGCCGGTCGG CGGCTGCGCA GGCCCGACCT CACGATCGCC ACCGAGGACC ACAACGTGCC CACGGTGGAC ATCGAGCTGC CGATCGCCGA CCCGGTGTCG CGCACGCAGG TGGAGACGTT GCGGCGCAAC TGCGCGGAGT TCGGGGTGCG GCTGCACCCC ATGGGCGACG CGGAGCAGGG GATCGTGCAC GTGGTGGGAC CGCAGCTCGG GCTGACCCAG CCGGGCATGA CGGTCGTGTG CGGCGACAGC CACACGTCCA CGCACGGCGC GTTCGGCGCG CTCGCGTTCG GCATCGGCAC GTCCGAGGTC GAGCACGTGA TGGCGACGCA GACGCTTCCC CTGCGCCCCT TCAAGACCAT GGCGATCAAC GTCGAGGGCT CGCTGCGGCC CGGCGTCACG GCCAAGGACG TCATCCTCGC CGTCATCGCG AAGATCGGCA CCGGCGGCGG CCAGGGGTAC GTGCTGGAGT ACCGGGGATC GGCGATCTCC GCGCTGTCCA TGGAAGCCCG CATGACGGTC TGCAACATGT CGATCGAGGC GGGCGCGCGC GCCGGGATGA TCGCGCCGGA CCAGACCACG TTCGACTACA TCAAGGGCCG CCCGCACGCG CCGTCCGGCG CCGACTGGGA CGCCGCCGTC GAGTACTGGT CGACGCTCGC CACCGACGAG GGCGCGGAGT TCGACGCCGA GGTGACCCTC GACGCGGACG AGCTGACGCC GTTCGTCACG TGGGGCACCA ACCCCGGCCA GGGCCTGCCG CTCGGCGCGT CCGTGCCGGA CCCCGAGGCG ATCGCGGACG AGAACGAGCG CGTGGCCGCC GAGAAGGCGC TGTCGTACAT GGGGCTGGAG GCGGGCACGC CGCTGCGCGA CATCCGCGTG GACACGGTGT TCCTCGGCTC TTGCACGAAC GGACGAATCG AGGACCTGCG CGCGGCGGCG GACGTGCTGC GCGGTCACCA TGTCGCGGAC GGCGTCCGGA TGCTGGTCGT GCCCGGCTCG ATGCGCGTGC GCGCGCAGGC CGAGACCGAG GGGCTGCACG AGGTGTTCCA GGCCGCGGGC GCGGAGTGGC GCCAGGCCGG GTGCTCGATG TGCCTGGGCA TGAACCCGGA CCAGCTCAAG CCGGGCGAGC GCAGCGCGTC CACCTCCAAC CGCAACTTCG AGGGCAGGCA GGGCAAGGGC GGTCGCACGC ACCTGGTGTC GCCGCTCGTC GCCGCCGCCA CGGCCGTGCG CGGCACCCTG TCGTCCCCGG CCGACCTGAC CCCCGCCGAC CTGGTCTGA
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Protein sequence | MSRTLAEKVW EAHVVRHGSG AEPDLLYIDL HLLHEVTSPQ AFDGLRLAGR RLRRPDLTIA TEDHNVPTVD IELPIADPVS RTQVETLRRN CAEFGVRLHP MGDAEQGIVH VVGPQLGLTQ PGMTVVCGDS HTSTHGAFGA LAFGIGTSEV EHVMATQTLP LRPFKTMAIN VEGSLRPGVT AKDVILAVIA KIGTGGGQGY VLEYRGSAIS ALSMEARMTV CNMSIEAGAR AGMIAPDQTT FDYIKGRPHA PSGADWDAAV EYWSTLATDE GAEFDAEVTL DADELTPFVT WGTNPGQGLP LGASVPDPEA IADENERVAA EKALSYMGLE AGTPLRDIRV DTVFLGSCTN GRIEDLRAAA DVLRGHHVAD GVRMLVVPGS MRVRAQAETE GLHEVFQAAG AEWRQAGCSM CLGMNPDQLK PGERSASTSN RNFEGRQGKG GRTHLVSPLV AAATAVRGTL SSPADLTPAD LV
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