| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8049 |
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| Symbol | |
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| ID | 8339427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 9341223 |
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| End bp | 9342629 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644961134 |
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| Product | 3-isopropylmalate dehydratase, large subunit |
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| Protein accession | YP_003118713 |
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| Protein GI | 256397149 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.200463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCACA CCCTGGCCGA GAAGGTGTGG GCGGACCATG TGGTCCGCTC GGCCGACGGC
GAGCCCGACC TGCTCTACAT CGACCTCCAC CTGCTGCACG AGGTGACCTC GCCGCAGGCC
TTCGACGGAC TCCGCCAGGC CGGCCGGACC GTGCGCCGCC CCGACCTCAC GATCGCCACC
GAGGACCACA ACACCCCGAC GCTGGAGATC GACAAGCCGA TCGCCGACCC GGTGTCCCGG
CTGCAGATCG AGACGCTGCG CAAGAACTGC GCCGACTTCG GCGTGCGCAT CCACTCCCTG
GGCGACGCCC AGCAGGGCAT CGTGCACGTG GTCGGGCCGC AGCTGGGCCT GACCCAGCCC
GGAATGACCG TGGTGTGCGG CGACTCACAC ACCTCCACCC ACGGCGCCTT CGGCGCGCTG
GCGTTCGGCA TCGGCACCAG CGAGGTCGAG CACGTGCTGG CGACCCAGAC GCTGCCGCTG
AAGCCGTTCA AGACGATGGC CGTCACGGTC ACCGGCGCGC TCGGCGAGGG CGTCACCGCC
AAGGACGTGG TGCTCGCCGT CATCGCGCAG ATCGGCACCG GCGGCGGGCA GGGCTACGTC
ATCGAGTACC GCGGCGAGGC CGTCGAGAAG CTGTCGATGG AGGGCCGGAT GACGGTCTGC
AACATGTCCA TCGAGGCCGG CGCCCGCGCC GGGATGATCG CCCCGGACGA GACCACGTTC
GCGTATCTGA AGGGCCGCGC GCACGCGCCC TCCGGCGCCG ACTGGGACGC CGCGGTGGAG
TACTGGAAGA CGCTGCGCAC CGAAGACGGC GCGACCTTCG ACGCCGAGGT GGTCATCGAC
GGCGACGCGC TGACCCCGTA CGTCACCTGG GGCACCAACC CCGGCCAAGG ACTGCCGCTG
TCGGCGTCGG TCCCGGACCC GGACAAGGAC TTCGGCGCCG AGGTCGACAA GGTCGCGGCG
CGCAAGGCGT TGGAATACAT GGGGCTGCAG GCCGGCACGC CGCTGCGCGA GATCAAGGTG
GACACGGTCT TCCTCGGCTC GTGCACCAAC GGCCGGCTGG AGGACCTGCG CGCCGCCGCC
GCGGTCATCA AGGGCCGCCA GGTCGCCGAC GGCGTCCGGA TGCTGGTGGT GCCGGGCTCG
GCGCGGGTGC GGCTGGAGGC CGAGGCCGAG GGTCTGCACG AGGTGTTCAC CGCCGCCGGC
GCCGAGTGGC GGTTCGCGGG CTGCTCGATG TGCCTGGGCA TGAACCCCGA CCAGCTGGCT
CCCGGCGAGC GCTCGGCGTC CACGTCCAAC CGCAACTTCG AGGGGCGGCA GGGCAAGGGC
GGGCGCACGC ACCTGGTGTC GCCGCTGGTG GCCGCCGCGA CGGCGGTCCG CGGAACCCTG
TCGTCCCCGT CGGATCTGGC CGCCTGA
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| Protein sequence | MPHTLAEKVW ADHVVRSADG EPDLLYIDLH LLHEVTSPQA FDGLRQAGRT VRRPDLTIAT
EDHNTPTLEI DKPIADPVSR LQIETLRKNC ADFGVRIHSL GDAQQGIVHV VGPQLGLTQP
GMTVVCGDSH TSTHGAFGAL AFGIGTSEVE HVLATQTLPL KPFKTMAVTV TGALGEGVTA
KDVVLAVIAQ IGTGGGQGYV IEYRGEAVEK LSMEGRMTVC NMSIEAGARA GMIAPDETTF
AYLKGRAHAP SGADWDAAVE YWKTLRTEDG ATFDAEVVID GDALTPYVTW GTNPGQGLPL
SASVPDPDKD FGAEVDKVAA RKALEYMGLQ AGTPLREIKV DTVFLGSCTN GRLEDLRAAA
AVIKGRQVAD GVRMLVVPGS ARVRLEAEAE GLHEVFTAAG AEWRFAGCSM CLGMNPDQLA
PGERSASTSN RNFEGRQGKG GRTHLVSPLV AAATAVRGTL SSPSDLAA
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