Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gdia_3280 |
Symbol | |
ID | 6976719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gluconacetobacter diazotrophicus PAl 5 |
Kingdom | Bacteria |
Replicon accession | NC_011365 |
Strand | + |
Start bp | 3588422 |
End bp | 3589825 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643392790 |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_002277622 |
Protein GI | 209545393 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.215534 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCAC GCACGCTGTT CGACAAGATC TGGGACAGTC ATGTCGTCGA ACGGCTTGAG GACGGCACGG CCATTCTCTA CATCGACCGC CACCTGGTGC ATGAAGTCAC CAGCCCCCAG GCGTTCGAGG GGCTGCGCGC CAGCGGCCGG CGCCTGCGCC GCCCGGACGC CACCATCGCG GTGGTGGACC ATAACGTGCC GACGTCGGAC CGTACCCGGC CGATCGAGGA ACCGGAAAGC CGCAACCAGG TCGAAACGCT GGAGCGCAAT GTCCGGGAAT TTGGCGTTCC CTATTTCCCG CTGCTGTCCG AACGCCAGGG CATCGTACAT GTCGTGGGGC CGGAACAGGG GATTTCGCTG CCTGGCATGA CCATCGTCTG CGGCGACAGC CATACGTCCA CCCACGGCGC GCTGGGTGCG CTGGCGTTCG GCATCGGCAC GTCCGAGGTC GAGCATGTCA TGGCGACCCA GACGCTGCTC CAGAAGCCCG CGCGGAACAT GAAGGTGGTG GTCGAGGGCC CGCTGGGCGC GGGGGTGACG GCCAAGGACG TGATGCTGGC GATCATCGGC CGCATCGGCA CGGCGGGCGG CACCGGGCAT GTGATCGAAT TCGCGGGATC GACCATTCGC GGGCTGGACA TGGCCGGCCG GATGACGATC TGCAACATGG CGATCGAAGC CGGCGCCCGC GCCGGCCTGG TCGCGCCCGA CCAGACGACG TTCGACTATG TGCGCGGCCG CCCCTTCGCC CCGCAGGGCG AGGCGTTCGA CCAGGCGGTG GCCTGGTGGA AGACGCTGCC TGCGGACGAG GGCGCGCAGT ACGACAAGGT CGTCGAATTG CGGGCCGAGG ACATTCCGCC GGTCCTGACC TGGGGCACCA GCCCGGAAAC CGTCATTCCG GTGACGGGCA CGGTCCCCGA TCCGCAGGCC GAGCCCGACG AGGCCCGGCG CGGGCAGATG CGGCGCATGC TGGACTATAT GGGCCTGCAG GCCGGGCAGC CGATTGCCGG CGTGCCGGTG GATGTCGTCT TCATCGGGTC CTGCACCAAC AGCCGGATCG AGGACCTGCG TTCGGCGGCC GCGGTGGTGG CGGGCCGTCA TGTCGCGCCG GGCGTGCGCG CGATGGTGGT GCCTGGTTCG GGCATCGTGA AGGCCCAGGC CGAGCAGGAG GGGCTGGACC GCATCTTCCG CGATGCCGGC TTCGAATGGC GCGAGGCAGG CTGTTCGATG TGCCTGGGCA TGAACCCGGA CAAGCTGACC CCCGGCCAGC GCTGCGCCTC GACCTCGAAC CGCAATTTCG AGGGACGGCA GGGCCCGGGC GGCCGCACCC ACCTGCTGTC GCCCGCCATG GCGGCGGCGG CGGCGGTCAC GGGACATCTG ACAGACGTGC GGGAGCTGAT CTGA
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Protein sequence | MAARTLFDKI WDSHVVERLE DGTAILYIDR HLVHEVTSPQ AFEGLRASGR RLRRPDATIA VVDHNVPTSD RTRPIEEPES RNQVETLERN VREFGVPYFP LLSERQGIVH VVGPEQGISL PGMTIVCGDS HTSTHGALGA LAFGIGTSEV EHVMATQTLL QKPARNMKVV VEGPLGAGVT AKDVMLAIIG RIGTAGGTGH VIEFAGSTIR GLDMAGRMTI CNMAIEAGAR AGLVAPDQTT FDYVRGRPFA PQGEAFDQAV AWWKTLPADE GAQYDKVVEL RAEDIPPVLT WGTSPETVIP VTGTVPDPQA EPDEARRGQM RRMLDYMGLQ AGQPIAGVPV DVVFIGSCTN SRIEDLRSAA AVVAGRHVAP GVRAMVVPGS GIVKAQAEQE GLDRIFRDAG FEWREAGCSM CLGMNPDKLT PGQRCASTSN RNFEGRQGPG GRTHLLSPAM AAAAAVTGHL TDVRELI
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